Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : AHG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 33


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 P1 P P1 N N N 0 -1.084 -0.06 -3.997
2 O1P O O1P N N N 0 -0.102 0.084 -5.095
3 O2P O O2P N N N 0 -2.312 -0.977 -4.492
4 O3P O O3P N N N 0 -1.635 1.391 -3.573
5 O1 O O1 N N N 0 -0.373 -0.755 -2.73
6 C1 C C1 N N N 0 0.701 0.101 -2.339
7 C2 C C2 S N N 0 1.422 -0.504 -1.133
8 C3 C C3 S N N 0 2.525 0.453 -0.614
9 O3 O O3 N N N 0 2.102 1.815 -0.706
10 C4 C C4 S N N 0 2.664 0.018 0.865
11 O4 O O4 N N N 0 3.768 -0.875 1.021
12 C5 C C5 R N N 0 1.336 -0.701 1.173
13 O5 O O5 N N N 0 0.523 -0.621 -0.008
14 C6 C C6 N N N 0 0.63 -0.01 2.342
15 O6 O O6 N N N 0 -0.598 -0.683 2.62
16 P2 P P2 N N N 0 -1.284 0.091 3.853
17 O4P O O4P N N N 0 -1.532 1.5 3.474
18 O5P O O5P N N N 0 -2.682 -0.618 4.222
19 O6P O O6P N N N 0 -0.304 0.043 5.13
20 HOP2 H HOP2 N N N 0 -2.709 -0.526 -5.25
21 HOP3 H HOP3 N N N 0 -2.27 1.251 -2.858
22 H11 H H11 N N N 0 0.306 1.081 -2.072
23 H12 H H12 N N N 0 1.402 0.205 -3.167
24 H2 H H2 N N N 0 1.846 -1.475 -1.388
25 H3 H H3 N N N 0 3.459 0.3 -1.154
26 HO3 H HO3 N N N 0 2.809 2.354 -0.327
27 H4 H H4 N N N 0 2.785 0.888 1.509
28 HO4 H HO4 N N N 0 4.561 -0.388 0.758
29 H5 H H5 N N N 0 1.529 -1.744 1.421
30 H61 H H61 N N N 0 1.27 -0.043 3.223
31 H62 H H62 N N N 0 0.425 1.027 2.08
32 HOP5 H HOP5 N N N 0 -3.059 -0.124 4.963
33 HOP6 H HOP6 N N N 0 -0.17 -0.89 5.343