Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : ARI

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O OGL N N Y 0 -0.886 0.902 3.274
2 C1 C C1 R N N 0 -0.393 -0.022 2.303
3 C2 C C2 N N N 0 -1.504 -0.347 1.302
4 C3 C C3 N N N 0 -0.977 -1.365 0.284
5 C4 C C4 R N N 0 0.315 -0.817 -0.33
6 O4 O O4 N N N 0 0.016 0.366 -1.116
7 CME C CME N N N 0 -0.597 1.478 -3.233
8 CO4 C CO4 N N N 0 -0.287 0.249 -2.418
9 OC4 O OC4 N N N 0 -0.311 -0.841 -2.937
10 C5 C C5 R N N 0 1.289 -0.458 0.793
11 O5 O O1 N N N 0 0.718 0.553 1.62
12 C6 C C6 N N N 0 2.597 0.055 0.189
13 HO1 H HOG N N Y 0 -0.159 1.077 3.887
14 H1 H H1 N N N 0 -0.076 -0.938 2.803
15 H2 H H21 N N N 0 -2.359 -0.768 1.83
16 H22 H H22 N N N 0 -1.806 0.563 0.784
17 H3 H H31 N N N 0 -0.773 -2.311 0.785
18 H32 H H32 N N N 0 -1.719 -1.516 -0.499
19 H4 H H4 N N N 0 0.764 -1.576 -0.971
20 H41 H H41 N N N 0 -0.818 1.187 -4.26
21 H42 H H42 N N N 0 -1.46 1.989 -2.806
22 H43 H H43 N N N 0 0.262 2.148 -3.222
23 H5 H H5 N N N 0 1.492 -1.345 1.394
24 H61 H H61 N N N 0 3.292 0.309 0.989
25 H62 H H62 N N N 0 3.035 -0.718 -0.441
26 H63 H H63 N N N 0 2.395 0.942 -0.411