Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : ARR

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 45


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 S S S N Y N 0 -1.164 0.945 -7.438
2 C1 C C1 N Y N 0 -0.576 1.001 -9.068
3 C2 C C2 N Y N 0 0.61 0.348 -8.992
4 C3 C C3 N Y N 0 1.027 -0.145 -7.778
5 C4 C C4 N Y N 0 0.189 0.052 -6.695
6 C5 C C5 N N N 0 0.37 -0.361 -5.295
7 N3 N N3 N N N 0 1.443 -1.016 -4.941
8 N1 N N1 N N N 0 -0.595 -0.057 -4.355
9 C6 C C6 N Y N 0 -0.375 -0.353 -3.007
10 C10 C C10 N Y N 0 0.909 -0.297 -2.483
11 C11 C C11 N Y N 0 1.123 -0.59 -1.15
12 C9 C C9 N Y N 0 0.06 -0.939 -0.338
13 C8 C C8 N Y N 0 -1.219 -1.0 -0.858
14 C7 C C7 N Y N 0 -1.441 -0.703 -2.188
15 C12 C C12 N N N 0 0.297 -1.258 1.115
16 C13 C C13 N N N 0 0.18 0.021 1.944
17 N2 N N2 N N N 0 0.411 -0.289 3.361
18 C14 C C14 N N N 0 0.285 0.975 4.097
19 C15 C C15 N Y N 0 0.512 0.726 5.566
20 C20 C C20 N Y N 0 -0.553 0.403 6.385
21 C19 C C19 N Y N 0 -0.345 0.181 7.735
22 C18 C C18 N Y N 0 0.93 0.27 8.262
23 C17 C C17 N Y N 0 1.996 0.586 7.441
24 C16 C C16 N Y N 0 1.787 0.813 6.093
25 CL CL CL N N N 0 -1.684 -0.215 8.766
26 H1 H H1 N N N 0 -1.042 1.447 -9.934
27 H2 H H2 N N N 0 1.221 0.22 -9.873
28 H3 H H3 N N N 0 1.965 -0.67 -7.675
29 HN3 H HN3 N N N 0 2.121 -1.23 -5.601
30 HN1 H HN1 N N N 0 -1.425 0.36 -4.631
31 H10 H H10 N N N 0 1.74 -0.024 -3.116
32 H11 H H11 N N N 0 2.122 -0.546 -0.742
33 H8 H H8 N N N 0 -2.048 -1.273 -0.221
34 H7 H H7 N N N 0 -2.441 -0.747 -2.592
35 H121 H 1H12 N N N 0 1.295 -1.68 1.236
36 H122 H 2H12 N N N 0 -0.445 -1.98 1.454
37 H131 H 1H13 N N N 0 -0.817 0.443 1.823
38 H132 H 2H13 N N N 0 0.923 0.743 1.605
39 HN2 H HN2 N N N 0 1.375 -0.577 3.441
40 H141 H 1H14 N N N 0 -0.713 1.384 3.948
41 H142 H 2H14 N N N 0 1.027 1.684 3.73
42 H20 H H20 N N N 0 -1.549 0.334 5.974
43 H18 H H18 N N N 0 1.094 0.092 9.314
44 H17 H H17 N N N 0 2.992 0.655 7.852
45 H16 H H16 N N N 0 2.62 1.061 5.452