Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : B3K

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 27


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N N N N N N 0 0.348 -3.287 -0.934
2 CA C CB S N N 0 0.72 -2.031 -0.275
3 CG C CG N N N 0 2.199 -1.706 -0.57
4 CD C CD N N N 0 3.214 -2.74 -0.063
5 CE C CE N N N 0 4.67 -2.338 -0.313
6 CF C CF N N N 0 5.633 -3.392 0.233
7 NZ N NZ N N N 0 7.013 -3.002 -0.031
8 CB C CA N N N 0 -0.211 -0.91 -0.769
9 C C C N N N 0 0.063 0.418 -0.101
10 O O O N N N 0 0.516 0.579 1.022
11 OXT O OXT N N Y 0 -0.232 1.437 -0.948
12 H H H N N N 0 0.329 -3.3 -1.928
13 H2 H H2 N N Y 0 -0.061 -4.0 -0.374
14 HA H HB N N N 0 0.582 -2.16 0.804
15 HG2 H HG2 N N N 0 2.341 -1.588 -1.651
16 HG3 H HG3 N N N 0 2.454 -0.735 -0.124
17 HD2 H HD2 N N N 0 3.017 -3.719 -0.517
18 HD3 H HD3 N N N 0 3.058 -2.864 1.016
19 HE2 H HE2 N N N 0 4.845 -2.212 -1.387
20 HE3 H HE3 N N N 0 4.869 -1.37 0.165
21 HF1 H HF1 N N N 0 5.491 -3.514 1.312
22 HXT H HXT N N Y 0 -0.037 2.312 -0.548
23 HF2 H HF2 N N N 0 5.439 -4.36 -0.242
24 HNZ1 H HNZ1 N N N 0 7.477 -2.427 0.64
25 HNZ2 H HNZ2 N N N 0 7.376 -3.145 -0.95
26 HB1 H HA1 N N N 0 -0.078 -0.751 -1.846
27 HB2 H HA2 N N N 0 -1.257 -1.188 -0.59