Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : B41

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 29


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 -2.541 -1.396 -0.64
2 O2 O O2 N N N 0 -3.44 0.177 0.719
3 N N N N N N 0 2.559 -1.194 0.066
4 CA C CA S N N 0 2.822 0.252 0.059
5 C C C N N N 0 4.272 0.504 -0.359
6 CB C CB N N N 0 1.879 0.937 -0.932
7 CG C CG N Y N 0 0.458 0.793 -0.454
8 CD1 C CD1 N Y N 0 -0.295 -0.299 -0.845
9 CD2 C CD2 N Y N 0 -0.091 1.753 0.377
10 CE1 C CE1 N Y N 0 -1.602 -0.433 -0.406
11 CE2 C CE2 N Y N 0 -1.395 1.625 0.819
12 CZ C CZ N Y N 0 -2.155 0.534 0.43
13 CM C CM N N N 0 2.966 -1.796 1.342
14 CT C CT N N N 0 -3.8 -0.802 -0.273
15 HN H HN N N N 0 3.016 -1.648 -0.71
16 HA H HA N N N 0 2.657 0.656 1.057
17 H H H N N N 0 4.438 0.099 -1.358
18 HB H HB N N N 0 4.468 1.576 -0.365
19 HC H HC N N N 0 4.944 0.015 0.346
20 HBA H HBA N N N 0 2.133 1.994 -1.003
21 HBB H HBB N N N 0 1.982 0.472 -1.912
22 HD1 H HD1 N N N 0 0.137 -1.047 -1.493
23 HD2 H HD2 N N N 0 0.5 2.603 0.682
24 HE2 H HE2 N N N 0 -1.821 2.376 1.468
25 HM H HM N N N 0 2.407 -1.335 2.157
26 HMA H HMA N N N 0 2.76 -2.867 1.321
27 HMB H HMB N N N 0 4.033 -1.635 1.497
28 HT H HT N N N 0 -4.262 -0.321 -1.136
29 HTA H HTA N N N 0 -4.468 -1.551 0.152