Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : C35

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 106


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C37 C C37 N Y N 0 -9.831 -0.142 -0.546
2 C36 C C36 N Y N 0 -11.195 -0.238 -0.739
3 C35 C C35 N Y N 0 -11.881 -1.355 -0.296
4 CL CL CL N N N 0 -13.596 -1.472 -0.541
5 C34 C C34 N Y N 0 -11.203 -2.379 0.342
6 C33 C C33 N Y N 0 -9.839 -2.288 0.537
7 C32 C C32 N Y N 0 -9.148 -1.169 0.094
8 N10 N N10 N Y N 0 -7.764 -1.074 0.291
9 N9 N N9 N Y N 0 -6.923 -0.526 -0.518
10 C30 C C30 N Y N 0 -7.086 -1.537 1.362
11 C31 C C31 N N N 0 -7.68 -2.244 2.553
12 N11 N N11 N Y N 0 -5.82 -1.261 1.178
13 C29 C C29 N Y N 0 -5.716 -0.625 -0.003
14 C28 C C28 N N N 0 -4.467 -0.124 -0.614
15 O5 O O5 N N N 0 -4.501 0.44 -1.69
16 N8 N N8 N N N 0 -3.291 -0.292 0.023
17 C23 C C23 S N N 0 -2.053 0.205 -0.583
18 C24 C C24 N N N 0 -1.868 1.681 -0.226
19 C25 C C25 N N N 0 -2.989 2.505 -0.863
20 C26 C C26 N N N 0 -2.803 3.981 -0.506
21 N5 N N5 N N N 0 -3.877 4.769 -1.116
22 C27 C C27 N N N 0 -4.705 5.437 -0.362
23 N6 N N6 N N N 0 -4.493 5.51 0.994
24 N7 N N7 N N N 0 -5.79 6.067 -0.923
25 C22 C C22 N N N 0 -0.884 -0.589 -0.059
26 O4 O O4 N N N 0 -1.067 -1.482 0.741
27 N4 N N4 N N N 0 0.365 -0.306 -0.48
28 C17 C C17 S N N 0 1.511 -1.002 0.11
29 C18 C C18 N N N 0 1.78 -2.292 -0.668
30 C19 C C19 N N N 0 2.965 -3.029 -0.041
31 C20 C C20 N N N 0 2.588 -3.498 1.366
32 C21 C C21 N N N 0 3.327 -4.24 -0.902
33 C16 C C16 N N N 0 2.727 -0.113 0.044
34 O3 O O3 N N N 0 2.751 0.825 -0.724
35 N3 N N3 N N N 0 3.786 -0.361 0.839
36 C11 C C11 S N N 0 4.923 0.563 0.854
37 C12 C C12 S N N 0 4.675 1.659 1.893
38 C15 C C15 N N N 0 4.659 1.04 3.293
39 C13 C C13 N N N 0 5.791 2.702 1.81
40 C14 C C14 N N N 0 5.703 3.437 0.471
41 C10 C C10 N N N 0 6.179 -0.19 1.208
42 O2 O O2 N N N 0 6.105 -1.268 1.759
43 N2 N N2 N N N 0 7.385 0.334 0.911
44 C8 C C8 S N N 0 8.601 -0.447 1.149
45 C9 C C9 N N N 0 9.038 -0.274 2.581
46 O1 O O1 N N N 0 8.397 0.433 3.329
47 N1 N N1 N N N 0 10.142 -0.904 3.03
48 C7 C C7 N N N 0 9.711 0.039 0.215
49 C6 C C6 N Y N 0 9.326 -0.247 -1.214
50 C5 C C5 N Y N 0 8.619 0.693 -1.941
51 C4 C C4 N Y N 0 8.265 0.431 -3.25
52 C3 C C3 N Y N 0 9.684 -1.448 -1.799
53 C1 C C1 N Y N 0 8.619 -0.773 -3.835
54 F1 F F1 N N N 0 8.274 -1.03 -5.116
55 C2 C C2 N Y N 0 9.327 -1.714 -3.107
56 H37 H H37 N N N 0 -9.295 0.728 -0.896
57 H36 H H36 N N N 0 -11.727 0.56 -1.236
58 H34 H H34 N N N 0 -11.741 -3.25 0.687
59 H33 H H33 N N N 0 -9.31 -3.088 1.035
60 H311 H 1H31 N N N 0 -7.694 -3.318 2.368
61 H312 H 2H31 N N N 0 -7.077 -2.035 3.437
62 H313 H 3H31 N N N 0 -8.698 -1.889 2.716
63 H8 H H8 N N N 0 -3.264 -0.742 0.881
64 H23 H H23 N N N 0 -2.109 0.098 -1.666
65 H241 H 1H24 N N N 0 -1.9 1.8 0.858
66 H242 H 2H24 N N N 0 -0.905 2.028 -0.6
67 H251 H 1H25 N N N 0 -2.956 2.386 -1.946
68 H252 H 2H25 N N N 0 -3.952 2.158 -0.488
69 H261 H 1H26 N N N 0 -2.836 4.1 0.577
70 H262 H 2H26 N N N 0 -1.84 4.327 -0.88
71 H6N1 H 1H6N N N N 0 -3.674 5.157 1.377
72 H6N2 H 2H6N N N N 0 -5.162 5.914 1.569
73 H7N1 H 1H7N N N N 0 -5.939 6.016 -1.88
74 H7N2 H 2H7N N N N 0 -6.406 6.564 -0.362
75 H4 H H4 N N N 0 0.505 0.358 -1.173
76 H17 H H17 N N N 0 1.294 -1.244 1.15
77 H181 H 1H18 N N N 0 0.896 -2.929 -0.632
78 H182 H 2H18 N N N 0 2.011 -2.049 -1.705
79 H19 H H19 N N N 0 3.821 -2.356 0.018
80 H201 H 1H20 N N N 0 3.454 -3.961 1.839
81 H202 H 2H20 N N N 0 2.263 -2.643 1.959
82 H203 H 3H20 N N N 0 1.777 -4.223 1.301
83 H211 H 1H21 N N N 0 3.596 -3.906 -1.904
84 H212 H 2H21 N N N 0 4.172 -4.765 -0.455
85 H213 H 3H21 N N N 0 2.471 -4.913 -0.961
86 H3 H H3 N N N 0 3.797 -1.152 1.401
87 H11 H H11 N N N 0 5.036 1.016 -0.131
88 H12 H H12 N N N 0 3.715 2.136 1.696
89 H151 H 1H15 N N N 0 5.588 0.493 3.459
90 H152 H 2H15 N N N 0 4.563 1.829 4.038
91 H153 H 3H15 N N N 0 3.815 0.355 3.377
92 H131 H 1H13 N N N 0 5.681 3.418 2.625
93 H132 H 2H13 N N N 0 6.759 2.207 1.89
94 H141 H 1H14 N N N 0 6.438 4.241 0.449
95 HA H HA N N N 0 8.4 -1.501 0.956
96 H142 H 2H14 N N N 0 5.906 2.738 -0.34
97 H143 H 3H14 N N N 0 4.704 3.855 0.351
98 H2 H H2 N N N 0 7.448 1.228 0.541
99 H7C1 H 1H7C N N N 0 9.851 1.112 0.345
100 H7C2 H 2H7C N N N 0 10.639 -0.48 0.452
101 H1N1 H 1H1N N N N 0 10.655 -1.469 2.432
102 H1N2 H 2H1N N N N 0 10.423 -0.792 3.951
103 H5 H H5 N N N 0 8.343 1.632 -1.484
104 HB H HB N N N 0 10.241 -2.179 -1.232
105 HC H HC N N N 0 7.712 1.165 -3.818
106 HD H HD N N N 0 9.603 -2.653 -3.562