Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : C7Z

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 98


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C6 C C1 N N N 0 -11.428 -0.257 0.075
2 C17 C C2 N N N 0 -12.339 -2.158 -1.219
3 C4 C C3 N N N 0 -13.022 1.368 1.088
4 C3 C C4 S N N 0 -13.763 1.268 -0.247
5 O3 O O1 N N N 0 -15.098 1.752 -0.091
6 C2 C C5 N N N 0 -13.796 -0.204 -0.677
7 C1 C C6 N N N 0 -12.372 -0.64 -1.027
8 C5 C C7 N N N 0 -11.714 0.635 1.009
9 C18 C C8 N N N 0 -10.669 0.931 2.053
10 C16 C C9 N N N 0 -11.94 0.044 -2.326
11 O23 O O2 N N N 0 15.089 -1.762 -0.173
12 C26 C C10 N N N 0 11.431 0.257 0.096
13 C7 C C11 N N N 0 -10.16 -0.89 0.121
14 C8 C C12 N N N 0 -9.026 -0.141 0.108
15 C11 C C16 N N N 0 -5.376 -0.645 0.137
16 C9 C C13 N N N 0 -7.769 -0.77 0.129
17 C19 C C14 N N N 0 -7.679 -2.274 0.164
18 C10 C C15 N N N 0 -6.629 -0.018 0.117
19 C12 C C17 N N N 0 -4.227 0.113 0.125
20 C13 C C18 N N N 0 -2.975 -0.513 0.145
21 C20 C C19 N N N 0 -2.885 -2.017 0.181
22 C40 C C25 N N N 0 2.889 2.017 0.113
23 C14 C C20 N N N 0 -1.824 0.246 0.133
24 C15 C C21 N N N 0 -0.573 -0.379 0.153
25 C35 C C22 N N N 0 0.578 0.38 0.141
26 C34 C C23 N N N 0 1.829 -0.246 0.161
27 C33 C C24 N N N 0 2.979 0.513 0.149
28 C32 C C26 N N N 0 4.231 -0.112 0.169
29 C31 C C27 N N N 0 5.38 0.646 0.157
30 C30 C C28 N N N 0 6.634 0.019 0.177
31 C29 C C29 N N N 0 7.773 0.771 0.165
32 C39 C C30 N N N 0 7.683 2.275 0.129
33 C28 C C31 N N N 0 9.03 0.142 0.185
34 C27 C C32 N N N 0 10.165 0.891 0.173
35 C21 C C33 N N N 0 12.348 0.644 -1.028
36 C36 C C34 N N N 0 11.88 -0.03 -2.319
37 C37 C C35 N N N 0 12.318 2.163 -1.208
38 C22 C C36 N N N 0 13.779 0.201 -0.715
39 C23 C C37 S N N 0 13.752 -1.273 -0.292
40 C24 C C38 N N N 0 13.044 -1.377 1.061
41 C25 C C39 N N N 0 11.739 -0.636 1.021
42 C38 C C40 N N N 0 10.721 -0.931 2.092
43 H1 H H1 N N N 0 -12.673 -2.647 -0.303
44 H2 H H2 N N N 0 -12.999 -2.435 -2.04
45 H3 H H3 N N N 0 -11.321 -2.473 -1.448
46 H4 H H4 N N N 0 -12.835 2.416 1.32
47 H5 H H5 N N N 0 -13.635 0.928 1.874
48 H6 H H6 N N N 0 -13.241 1.858 -1.0
49 H7 H H7 N N N 0 -15.151 2.674 0.194
50 H8 H H8 N N N 0 -14.175 -0.816 0.141
51 H12 H H12 N N N 0 -10.12 0.019 2.288
52 H9 H H9 N N N 0 -14.441 -0.317 -1.548
53 H10 H H10 N N N 0 -9.977 1.683 1.672
54 H11 H H11 N N N 0 -11.152 1.307 2.955
55 H13 H H13 N N N 0 -10.93 -0.272 -2.585
56 H14 H H14 N N N 0 -12.624 -0.233 -3.128
57 H15 H H15 N N N 0 -11.958 1.126 -2.19
58 H16 H H16 N N N 0 15.146 -2.691 0.093
59 H18 H H18 N N N 0 -10.096 -1.967 0.165
60 H19 H H19 N N N 0 -9.09 0.936 0.083
61 H20 H H20 N N N 0 -7.653 -2.661 -0.854
62 H21 H H21 N N N 0 -6.772 -2.572 0.69
63 H22 H H22 N N N 0 -8.548 -2.678 0.684
64 H23 H H23 N N N 0 -6.694 1.059 0.091
65 H24 H H24 N N N 0 -5.312 -1.723 0.163
66 H25 H H25 N N N 0 -4.291 1.191 0.099
67 H26 H H26 N N N 0 -2.859 -2.403 -0.838
68 H27 H H27 N N N 0 -1.977 -2.314 0.706
69 H28 H H28 N N N 0 -3.754 -2.42 0.7
70 H29 H H29 N N N 0 -1.889 1.324 0.107
71 H30 H H30 N N N 0 -0.509 -1.457 0.179
72 H31 H H31 N N N 0 0.513 1.458 0.115
73 H32 H H32 N N N 0 1.893 -1.324 0.187
74 H33 H H33 N N N 0 2.863 2.404 1.132
75 H34 H H34 N N N 0 3.759 2.421 -0.406
76 H35 H H35 N N N 0 1.982 2.315 -0.412
77 H36 H H36 N N N 0 4.295 -1.19 0.195
78 H37 H H37 N N N 0 5.316 1.724 0.131
79 H38 H H38 N N N 0 6.698 -1.059 0.203
80 H39 H H39 N N N 0 7.657 2.661 1.148
81 H40 H H40 N N N 0 8.552 2.678 -0.39
82 H41 H H41 N N N 0 6.776 2.572 -0.396
83 H42 H H42 N N N 0 9.094 -0.936 0.211
84 H43 H H43 N N N 0 10.102 1.968 0.222
85 H44 H H44 N N N 0 10.865 0.293 -2.55
86 H45 H H45 N N N 0 12.545 0.249 -3.136
87 H46 H H46 N N N 0 11.896 -1.112 -2.191
88 H47 H H47 N N N 0 12.678 2.644 -0.299
89 H48 H H48 N N N 0 12.958 2.442 -2.045
90 H49 H H49 N N N 0 11.296 2.484 -1.409
91 H50 H H50 N N N 0 14.4 0.316 -1.603
92 H51 H H51 N N N 0 14.181 0.808 0.097
93 H52 H H52 N N N 0 13.21 -1.857 -1.035
94 H53 H H53 N N N 0 12.859 -2.426 1.291
95 H54 H H54 N N N 0 13.678 -0.945 1.835
96 H56 H H56 N N N 0 10.016 -1.679 1.728
97 H57 H H57 N N N 0 11.227 -1.31 2.98
98 H58 H H58 N N N 0 10.183 -0.017 2.343