Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : C8N

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 48


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O01 O O1 N N N 0 -4.775 2.907 -0.47
2 C02 C C1 N N N 0 -3.693 2.115 -0.533
3 O03 O O2 N N N 0 -2.984 2.138 -1.51
4 C04 C C2 S N N 0 -3.363 1.198 0.617
5 C05 C C3 N N N 0 -4.512 0.21 0.804
6 S06 S S1 N N N 0 -3.737 -1.419 0.592
7 C07 C C4 N N N 0 -2.099 -0.816 0.296
8 C08 C C5 N N N 0 -0.943 -1.537 0.043
9 C10 C C6 N N N 0 -0.709 -3.392 -1.367
10 N09 N N1 N N N 1 -0.992 -2.934 0.0
11 C11 C C7 N N N 0 0.012 -3.487 0.919
12 C12 C C8 N N N 0 0.263 -0.881 -0.168
13 C13 C C9 N N N 0 1.526 -1.656 -0.442
14 C14 C C10 N Y N 0 2.633 -0.7 -0.805
15 C15 C C11 N Y N 0 2.989 -0.527 -2.107
16 C16 C C12 N Y N 0 4.01 0.352 -2.461
17 C17 C C13 N Y N 0 4.682 1.064 -1.515
18 C18 C C14 N Y N 0 4.344 0.911 -0.16
19 C19 C C15 N Y N 0 5.015 1.628 0.845
20 C20 C C16 N Y N 0 4.66 1.455 2.148
21 C21 C C17 N Y N 0 3.639 0.576 2.502
22 C22 C C18 N Y N 0 2.967 -0.135 1.556
23 C23 C C19 N Y N 0 3.301 0.022 0.2
24 C24 C C20 N N N 0 0.277 0.498 -0.119
25 C25 C C21 N N N 0 -0.903 1.19 0.137
26 O26 O O3 N N N 0 -0.879 2.41 0.178
27 N27 N N2 N N N 0 -2.087 0.539 0.344
28 H1 H H1 N N N 0 -4.946 3.478 -1.232
29 H041 H H2 N N N 0 -3.261 1.795 1.524
30 H052 H H3 N N N 0 -4.936 0.304 1.804
31 H051 H H4 N N N 0 -5.279 0.369 0.047
32 H112 H H8 N N N 0 0.101 -2.84 1.792
33 H101 H H5 N N N 0 0.369 -3.465 -1.51
34 H103 H H6 N N N 0 -1.163 -4.37 -1.524
35 H102 H H7 N N N 0 -1.123 -2.68 -2.081
36 H113 H H9 N N N 0 -0.295 -4.484 1.235
37 H111 H H10 N N N 0 0.975 -3.547 0.412
38 H132 H H11 N N N 0 1.808 -2.218 0.448
39 H131 H H12 N N N 0 1.357 -2.346 -1.269
40 H151 H H13 N N N 0 2.472 -1.08 -2.877
41 H161 H H14 N N N 0 4.273 0.471 -3.502
42 H171 H H15 N N N 0 5.472 1.741 -1.805
43 H191 H H16 N N N 0 5.809 2.313 0.585
44 H241 H H20 N N N 0 1.199 1.038 -0.278
45 H201 H H17 N N N 0 5.178 2.007 2.918
46 H211 H H18 N N N 0 3.378 0.456 3.543
47 H221 H H19 N N N 0 2.178 -0.814 1.845
48 H091 H H21 N N N 0 -1.91 -3.247 0.277