Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : CKM

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 78


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C2 C C1 S N N 0 3.612 0.514 -1.36
2 C7 C C2 N Y N 0 1.87 -2.125 0.868
3 C9 C C3 N Y N 0 1.387 -4.47 0.846
4 C10 C C4 N Y N 0 2.737 -4.747 0.744
5 C11 C C5 N Y N 0 3.654 -3.714 0.697
6 C12 C C6 N N N 0 1.953 2.26 -0.696
7 C13 C C7 N Y N 0 1.323 2.975 0.472
8 C15 C C8 N Y N 0 -0.409 3.133 2.131
9 C18 C C9 N Y N 0 1.892 4.138 0.961
10 N19 N N1 N N N 0 -0.413 1.3 0.559
11 C20 C C10 N N N 0 -1.721 1.054 0.772
12 C22 C C11 N N N 0 -2.32 -0.261 0.344
13 C8 C C12 N Y N 0 0.953 -3.159 0.908
14 C16 C C13 N Y N 0 0.167 4.29 2.619
15 C26 C C14 N Y N 0 -4.202 0.969 -1.431
16 C30 C C15 N Y N 0 -5.527 1.524 0.486
17 C31 C C16 N Y N 0 -5.04 -2.358 1.366
18 C35 C C17 N Y N 0 -4.244 -2.17 -0.886
19 C17 C C18 N Y N 0 1.314 4.794 2.034
20 C27 C C19 N Y N 0 -4.87 1.927 -2.171
21 C29 C C20 N Y N 0 -6.192 2.486 -0.25
22 C32 C C21 N Y N 0 -5.57 -3.601 1.076
23 C34 C C22 N Y N 0 -4.778 -3.41 -1.179
24 C25 C C23 N Y N 0 -4.532 0.766 -0.104
25 C24 C C24 N Y N 0 -4.38 -1.641 0.385
26 C14 C C25 N Y N 0 0.169 2.471 1.055
27 C28 C C26 N Y N 0 -5.865 2.687 -1.581
28 C33 C C27 N Y N 0 -5.439 -4.129 -0.197
29 C6 C C28 N Y N 0 3.22 -2.402 0.76
30 C C C29 N N N 0 6.22 -0.089 -2.502
31 C1 C C30 N N N 0 4.492 1.554 -2.061
32 C38 C C31 R N N 0 5.41 -1.197 -1.819
33 C39 C C32 N N N 0 6.356 -2.134 -1.065
34 C4 C C33 N N N 0 2.888 1.165 -0.18
35 C23 C C34 N N N 0 -3.808 -0.283 0.7
36 N3 N N2 N N N 0 4.472 -0.574 -0.873
37 N N N3 N N N 0 5.3 0.891 -3.093
38 O21 O O1 N N N 0 -2.415 1.891 1.309
39 O O O2 N N N 0 3.821 -0.012 1.441
40 O5 O O3 N N N 0 5.653 -1.656 1.005
41 F37 F F1 N N N 0 -6.514 3.627 -2.301
42 F36 F F2 N N N 0 -5.957 -5.344 -0.481
43 F F F3 N N N 0 3.013 4.632 0.391
44 S S S1 N N N 0 4.388 -1.085 0.701
45 H1 H H1 N N N 0 2.88 0.116 -2.063
46 H2 H H2 N N N 0 1.531 -1.101 0.916
47 H3 H H3 N N N 0 0.67 -5.278 0.877
48 H4 H H4 N N N 0 3.076 -5.772 0.695
49 H5 H H5 N N N 0 4.708 -3.93 0.617
50 H6 H H6 N N N 0 1.172 1.812 -1.311
51 H7 H H7 N N N 0 2.522 2.972 -1.294
52 H8 H H8 N N N 0 -1.304 2.741 2.589
53 H9 H H9 N N N 0 0.125 0.664 0.061
54 H10 H H10 N N N 0 -2.202 -0.381 -0.733
55 H11 H H11 N N N 0 -1.811 -1.077 0.858
56 H12 H H12 N N N 0 -0.102 -2.942 0.987
57 H13 H H13 N N N 0 -0.28 4.802 3.459
58 H14 H H14 N N N 0 -3.425 0.376 -1.891
59 H15 H H15 N N N 0 -5.784 1.364 1.523
60 H16 H H16 N N N 0 -5.145 -1.944 2.358
61 H17 H H17 N N N 0 -3.728 -1.61 -1.651
62 H18 H H18 N N N 0 1.759 5.701 2.415
63 H19 H H19 N N N 0 -4.614 2.082 -3.208
64 H20 H H20 N N N 0 -6.968 3.078 0.211
65 H21 H H21 N N N 0 -6.085 -4.16 1.843
66 H22 H H22 N N N 0 -4.673 -3.823 -2.171
67 H23 H H23 N N N 0 6.854 0.404 -1.765
68 H24 H H24 N N N 0 6.842 -0.523 -3.285
69 H25 H H25 N N N 0 3.861 2.312 -2.524
70 H26 H H26 N N N 0 5.15 2.025 -1.331
71 H27 H H27 N N N 0 4.857 -1.762 -2.569
72 H28 H H28 N N N 0 6.984 -1.551 -0.391
73 H29 H H29 N N N 0 5.772 -2.851 -0.487
74 H30 H H30 N N N 0 6.984 -2.667 -1.778
75 H31 H H31 N N N 0 2.306 0.411 0.35
76 H32 H H32 N N N 0 3.62 1.602 0.499
77 H33 H H33 N N N 0 -3.931 -0.075 1.763
78 H34 H H34 N N N 0 4.712 0.461 -3.791