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PDBeChem : Atoms of Molecule
Molecule : CX2
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 42
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
P |
P |
P |
N |
N |
N |
0 |
-3.499 |
1.0 |
-0.066 |
2 |
S |
S |
S |
N |
N |
N |
0 |
-3.166 |
-4.167 |
0.46 |
3 |
N1 |
N |
N1 |
N |
N |
N |
0 |
3.1 |
0.031 |
0.597 |
4 |
C2 |
C |
C2 |
N |
N |
N |
0 |
3.001 |
-0.4 |
-0.674 |
5 |
O2 |
O |
O2 |
N |
N |
N |
0 |
2.212 |
0.14 |
-1.431 |
6 |
N3 |
N |
N3 |
N |
N |
N |
0 |
3.752 |
-1.406 |
-1.119 |
7 |
C4 |
C |
C4 |
N |
N |
N |
0 |
4.619 |
-2.011 |
-0.317 |
8 |
N4 |
N |
N4 |
N |
N |
N |
0 |
5.389 |
-3.049 |
-0.788 |
9 |
C5 |
C |
C5 |
N |
N |
N |
0 |
4.746 |
-1.584 |
1.02 |
10 |
C6 |
C |
C6 |
N |
N |
N |
0 |
3.976 |
-0.559 |
1.458 |
11 |
C1' |
C |
C1' |
R |
N |
N |
0 |
2.266 |
1.144 |
1.056 |
12 |
C2' |
C |
C2' |
N |
N |
N |
0 |
2.65 |
2.433 |
0.303 |
13 |
C3' |
C |
C3' |
S |
N |
N |
0 |
1.338 |
2.873 |
-0.39 |
14 |
O3' |
O |
O3' |
N |
N |
N |
0 |
1.169 |
4.29 |
-0.309 |
15 |
C4' |
C |
C4' |
R |
N |
N |
0 |
0.264 |
2.14 |
0.453 |
16 |
N4' |
N |
N4' |
N |
N |
N |
0 |
-3.433 |
-0.393 |
-1.008 |
17 |
O4' |
O |
O4' |
N |
N |
N |
0 |
0.885 |
0.874 |
0.762 |
18 |
C5' |
C |
C5' |
N |
N |
N |
0 |
-1.012 |
1.929 |
-0.365 |
19 |
O5' |
O |
O5' |
N |
N |
N |
0 |
-2.023 |
1.357 |
0.468 |
20 |
C7' |
C |
C7' |
N |
N |
N |
0 |
-2.925 |
-1.531 |
-0.231 |
21 |
C8' |
C |
C8' |
N |
N |
N |
0 |
-3.794 |
-2.761 |
-0.5 |
22 |
OP1 |
O |
OP1 |
N |
N |
N |
0 |
-4.015 |
2.123 |
-0.88 |
23 |
HS |
H |
HS |
N |
N |
N |
0 |
-4.011 |
-5.16 |
0.13 |
24 |
HN4 |
H |
HN4 |
N |
N |
N |
0 |
5.299 |
-3.34 |
-1.709 |
25 |
HN4A |
H |
HN4A |
N |
N |
N |
0 |
6.022 |
-3.489 |
-0.199 |
26 |
H5 |
H |
H5 |
N |
N |
N |
0 |
5.447 |
-2.066 |
1.686 |
27 |
H6 |
H |
H6 |
N |
N |
N |
0 |
4.056 |
-0.213 |
2.478 |
28 |
H1' |
H |
H1' |
N |
N |
N |
0 |
2.398 |
1.289 |
2.128 |
29 |
H2' |
H |
H2' |
N |
N |
N |
0 |
2.988 |
3.197 |
1.002 |
30 |
H2'A |
H |
H2'A |
N |
N |
N |
0 |
3.422 |
2.225 |
-0.439 |
31 |
H3' |
H |
H3' |
N |
N |
N |
0 |
1.314 |
2.539 |
-1.427 |
32 |
HO3' |
H |
HO3' |
N |
N |
N |
0 |
1.869 |
4.795 |
-0.746 |
33 |
H4' |
H |
H4' |
N |
N |
N |
0 |
0.048 |
2.694 |
1.366 |
34 |
HN4' |
H |
HN4' |
N |
N |
N |
0 |
-4.336 |
-0.602 |
-1.408 |
35 |
H5' |
H |
H5' |
N |
N |
N |
0 |
-1.358 |
2.887 |
-0.752 |
36 |
H5'A |
H |
H5'A |
N |
N |
N |
0 |
-0.803 |
1.255 |
-1.197 |
37 |
H7' |
H |
H7' |
N |
N |
N |
0 |
-1.896 |
-1.741 |
-0.525 |
38 |
H7'A |
H |
H7'A |
N |
N |
N |
0 |
-2.957 |
-1.289 |
0.831 |
39 |
H8' |
H |
H8' |
N |
N |
N |
0 |
-3.761 |
-3.004 |
-1.562 |
40 |
H8'A |
H |
H8'A |
N |
N |
N |
0 |
-4.822 |
-2.551 |
-0.206 |
41 |
OP3 |
O |
OP3 |
N |
N |
Y |
0 |
-4.478 |
0.753 |
1.189 |
42 |
HOP3 |
H |
HOP3 |
N |
N |
Y |
0 |
-4.201 |
0.03 |
1.768 |
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