Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : DJQ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 64


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N Y N 0 6.296 -0.9 0.24
2 C7 C C2 N Y N 0 4.383 -1.0 1.139
3 C13 C C3 N N N 0 0.295 0.167 -1.882
4 C17 C C4 N N N 0 -0.872 0.763 0.258
5 C20 C C5 N Y N 0 -5.405 -0.591 -1.627
6 C21 C C6 N Y N 0 -6.559 -0.518 -0.908
7 C22 C C7 N Y N 0 -6.579 -0.919 0.429
8 C24 C C8 N Y N 0 -4.22 -1.472 0.29
9 C1 C C9 N N N 0 8.857 -1.321 0.194
10 C2 C C10 N N N 0 7.666 -0.438 -0.183
11 C3 C C11 N N N 0 8.386 -1.254 -1.26
12 N5 N N1 N Y N 0 5.72 -2.013 -0.102
13 O6 O O1 N Y N 0 4.62 -2.09 0.404
14 N8 N N2 N Y N 0 5.446 -0.238 1.046
15 C9 C C12 N N N 0 3.134 -0.704 1.929
16 N10 N N3 N N N 0 2.179 0.015 1.082
17 C11 C C13 N N N 0 1.238 -0.562 0.306
18 C12 C C14 N N N 0 0.479 0.527 -0.411
19 C14 C C15 N N N 0 -0.539 -1.115 -1.992
20 N15 N N4 N N N 0 -1.789 -0.931 -1.242
21 C16 C C16 N N N 0 -1.715 -0.515 0.166
22 C18 C C17 N N N 0 -2.981 -1.139 -1.834
23 C19 C C18 N Y N 0 -4.223 -1.067 -1.039
24 C23 C C19 N Y N 0 -5.399 -1.4 1.033
25 C25 C C20 N Y N 0 -5.75 -1.731 2.411
26 C30 C C21 N N N 0 2.099 1.475 0.948
27 N26 N N5 N Y N 0 -7.014 -1.461 2.574
28 N27 N N6 N Y N 0 -7.556 -0.963 1.385
29 O28 O O2 N N N 0 -3.034 -1.386 -3.023
30 N29 N N7 N N N 0 1.323 1.734 -0.287
31 C31 C C22 N Y N 0 0.538 2.882 -0.154
32 C32 C C23 N Y N 0 0.692 3.706 0.954
33 C33 C C24 N Y N 0 -0.085 4.84 1.083
34 C34 C C25 N Y N 0 -1.016 5.156 0.111
35 C35 C C26 N Y N 0 -1.172 4.338 -0.994
36 C36 C C27 N Y N 0 -0.394 3.206 -1.132
37 O37 O O3 N N N 0 1.037 -1.754 0.202
38 H1 H H1 N N N 0 -0.22 0.98 -2.394
39 H2 H H2 N N N 0 1.27 0.007 -2.342
40 H3 H H3 N N N 0 -0.718 1.022 1.306
41 H4 H H4 N N N 0 -1.39 1.578 -0.246
42 H5 H H5 N N N 0 -5.4 -0.282 -2.662
43 H6 H H6 N N N 0 -7.461 -0.15 -1.373
44 H7 H H7 N N N 0 -3.312 -1.84 0.745
45 H8 H H8 N N N 0 9.794 -0.823 0.443
46 H9 H H9 N N N 0 8.649 -2.237 0.749
47 H13 H H13 N N N 0 2.687 -1.64 2.266
48 H10 H H10 N N N 0 7.82 0.641 -0.183
49 H11 H H11 N N N 0 9.012 -0.711 -1.967
50 H12 H H12 N N N 0 7.868 -2.124 -1.661
51 H14 H H14 N N N 0 3.387 -0.09 2.793
52 H15 H H15 N N N 0 -0.767 -1.314 -3.039
53 H16 H H16 N N N 0 0.021 -1.952 -1.574
54 H17 H H17 N N N 0 -1.25 -1.304 0.756
55 H18 H H18 N N N 0 -2.719 -0.318 0.542
56 H19 H H19 N N N 0 -5.082 -2.127 3.161
57 H21 H H21 N N N 0 1.586 1.903 1.809
58 H22 H H22 N N N 0 3.099 1.899 0.858
59 H23 H H23 N N N 0 1.418 3.459 1.714
60 H24 H H24 N N N 0 0.034 5.481 1.944
61 H25 H H25 N N N 0 -1.623 6.043 0.214
62 H26 H H26 N N N 0 -1.9 4.588 -1.751
63 H27 H H27 N N N 0 -0.513 2.57 -1.996
64 H20 H H20 N N N 0 -8.479 -0.692 1.259