Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : DW9

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 34


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 3.575 -0.614 -0.689
2 C2 C C2 N Y N 0 3.832 0.094 0.487
3 C3 C C3 N Y N 0 2.961 1.092 0.917
4 C4 C C4 N Y N 0 1.827 1.393 0.18
5 C5 C C5 N Y N 0 1.559 0.693 -0.996
6 C6 C C6 N Y N 0 2.411 -0.298 -1.427
7 C8 C C7 N Y N 0 5.499 -1.662 -0.134
8 C14 C C8 N Y N 0 -1.824 1.389 -0.178
9 C15 C C9 N Y N 0 -1.555 0.684 0.994
10 C16 C C10 N Y N 0 -2.409 -0.305 1.425
11 C17 C C11 N Y N 0 -3.574 -0.619 0.686
12 C18 C C12 N Y N 0 -3.832 0.094 -0.487
13 C19 C C13 N Y N 0 -2.96 1.093 -0.914
14 C21 C C14 N Y N 0 -5.501 -1.661 0.131
15 N7 N N1 N Y N 0 4.518 -1.544 -0.958
16 N10 N N2 N N N 0 6.539 -2.563 -0.269
17 N20 N N3 N Y N 0 -4.517 -1.549 0.953
18 N24 N N4 N N N 0 -6.543 -2.56 0.265
19 O11 O O1 N N N 0 2.136 -0.97 -2.576
20 O23 O O2 N N N 0 -2.132 -0.984 2.57
21 S22 S S4 N Y N 0 -5.333 -0.509 -1.186
22 S9 S S1 N Y N 0 5.33 -0.516 1.188
23 S12 S S2 N N N 0 0.727 2.655 0.727
24 S13 S S3 N N N 0 -0.728 2.658 -0.718
25 H1 H H1 N N N 0 3.169 1.633 1.828
26 H2 H H2 N N N 0 0.675 0.928 -1.57
27 H3 H H3 N N N 0 -0.669 0.914 1.567
28 H4 H H4 N N N 0 -3.17 1.639 -1.822
29 H5 H H5 N N N 0 6.563 -3.165 -1.029
30 H6 H H6 N N N 0 7.245 -2.592 0.396
31 H7 H H7 N N N 0 -6.566 -3.166 1.022
32 H8 H H8 N N N 0 -7.25 -2.585 -0.398
33 H9 H H9 N N N 0 2.518 -0.568 -3.368
34 H10 H H10 N N N 0 -2.508 -0.583 3.365