Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : E9J

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 25


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C02 C C1 N N N 0 3.113 -0.669 0.145
2 C03 C C2 N N N 0 2.022 0.353 0.149
3 C05 C C3 S N N 0 -0.3 1.004 -0.198
4 C06 C C4 N N N 0 -0.296 1.759 -1.528
5 C07 C C5 N Y N 0 -1.63 0.319 -0.012
6 C08 C C6 N Y N 0 -2.593 0.889 0.798
7 C09 C C7 N Y N 0 -3.813 0.261 0.968
8 C10 C C8 N Y N 0 -4.069 -0.937 0.327
9 C11 C C9 N Y N 0 -3.105 -1.507 -0.484
10 C12 C C10 N Y N 0 -1.887 -0.876 -0.657
11 N04 N N1 N N N 0 0.769 0.002 -0.201
12 O01 O O1 N N N 0 2.871 -1.812 -0.178
13 O13 O O2 N N N 0 2.265 1.498 0.468
14 O14 O O3 N N N 0 4.364 -0.319 0.495
15 H1 H H1 N N N 0 -0.136 1.707 0.619
16 H2 H H2 N N N 0 -1.092 2.504 -1.526
17 H3 H H3 N N N 0 0.665 2.254 -1.663
18 H4 H H4 N N N 0 -0.46 1.056 -2.345
19 H5 H H5 N N N 0 -2.394 1.825 1.299
20 H6 H H6 N N N 0 -4.566 0.706 1.602
21 H7 H H7 N N N 0 -5.022 -1.428 0.461
22 H8 H H8 N N N 0 -3.305 -2.443 -0.984
23 H9 H H9 N N N 0 -1.136 -1.319 -1.294
24 H10 H H10 N N N 0 0.575 -0.914 -0.456
25 H11 H H11 N N N 0 5.035 -1.015 0.477