Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : EC9

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 36


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 1.115 -1.958 0.643
2 C14 C C2 N Y N 0 2.875 0.777 0.412
3 C15 C C3 N Y N 0 2.644 0.438 -0.917
4 C16 C C4 N Y N 0 3.692 0.496 -1.818
5 C17 C C5 N Y N 0 4.941 0.893 -1.358
6 C18 C C6 N Y N 0 5.099 1.215 -0.025
7 C19 C C7 N N N 0 -3.88 1.77 -0.271
8 C2 C C8 N Y N 0 0.741 -3.226 0.314
9 C21 C C9 N N N 0 -4.883 2.872 -0.5
10 C3 C C10 N Y N 0 -0.556 -3.501 -0.107
11 C4 C C11 N Y N 0 -1.494 -2.498 -0.201
12 C5 C C12 N Y N 0 -1.135 -1.177 0.133
13 C6 C C13 N Y N 0 0.185 -0.912 0.564
14 C7 C C14 N Y N 0 0.545 0.417 0.9
15 C8 C C15 N Y N 0 -0.421 1.399 0.789
16 C9 C C16 N Y N 0 -1.704 1.06 0.356
17 N10 N N1 N Y N 0 -2.027 -0.182 0.057
18 N12 N N2 N N N 0 -2.67 2.057 0.247
19 N13 N N3 N N N 0 1.831 0.723 1.329
20 N22 N N4 N Y N 0 4.082 1.145 0.814
21 O11 O O1 N N N 0 -2.757 -2.78 -0.615
22 O20 O O2 N N N 0 -4.162 0.625 -0.555
23 H1 H H1 N N N 0 2.126 -1.759 0.968
24 H2 H H2 N N N 0 1.66 0.133 -1.241
25 H3 H H3 N N N 0 3.543 0.238 -2.856
26 H4 H H4 N N N 0 5.78 0.948 -2.035
27 H5 H H5 N N N 0 6.068 1.524 0.338
28 H6 H H6 N N N 0 1.461 -4.028 0.38
29 H7 H H7 N N N 0 -5.796 2.451 -0.922
30 H8 H H8 N N N 0 -5.112 3.357 0.449
31 H9 H H9 N N N 0 -4.467 3.604 -1.192
32 H10 H H10 N N N 0 -0.831 -4.514 -0.363
33 H11 H H11 N N N 0 -0.184 2.424 1.037
34 H12 H H12 N N N 0 -2.471 2.959 0.545
35 H13 H H13 N N N 0 2.0 0.899 2.268
36 H14 H H14 N N N 0 -3.364 -3.008 0.103