Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : EFB

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 129


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1A C C1 N N N 0 -5.742 2.606 -0.677
2 C10 C C2 S N N 0 -5.088 1.335 -1.234
3 C11 C C3 R N N 0 -3.657 1.253 -0.7
4 C35 C C7 N N N 0 -0.843 3.741 -1.004
5 C34 C C8 N N N 0 0.144 4.146 -0.206
6 C33 C C9 S N N 0 1.176 5.153 -0.62
7 C3B C C10 N N N 0 1.56 4.974 -2.087
8 C32 C C11 R N N 0 2.421 5.068 0.264
9 O32 O O3 N N N 0 2.04 5.316 1.622
10 C31 C C12 S N N 0 3.086 3.693 0.178
11 C2D C C16 N N N 0 4.725 1.737 -1.125
12 C12 C C4 R N N 0 -3.031 -0.098 -1.049
13 C1B C C5 N N N 0 -2.85 -0.203 -2.562
14 O37 O O1 N N N 0 -2.833 2.312 -1.261
15 C36 C C6 N N N 0 -1.785 2.718 -0.517
16 O36 O O2 N N N 0 -1.603 2.221 0.578
17 C3A C C13 N N N 0 2.643 2.865 1.395
18 C30 C C14 N N N 0 4.586 3.829 0.206
19 O30 O O4 N N N 0 5.087 4.85 0.632
20 C29 C C15 R N N 0 5.509 2.731 -0.28
21 C28 C C17 R N N 0 6.239 2.091 0.888
22 O28 O O5 N N N 0 5.369 1.886 2.002
23 C27 C C18 S N N 0 6.982 0.803 0.561
24 C2C C C19 N N N 0 7.756 0.922 -0.748
25 C26 C C20 N N N 0 6.098 -0.404 0.609
26 O26 O O6 N N N 0 4.918 -0.28 0.882
27 C25 C C21 R N N 0 6.599 -1.81 0.373
28 C2B C C22 N N N 0 7.492 -2.215 1.549
29 O25 O O7 N N N 0 7.337 -1.886 -0.844
30 C24 C C23 S N N 0 5.388 -2.743 0.292
31 O24 O O8 N N N 0 4.508 -2.286 -0.746
32 C23 C C24 R N N 0 5.794 -4.182 -0.013
33 C2A C C25 N N N 0 5.724 -4.43 -1.525
34 C22 C C26 N N N 0 4.839 -5.156 0.687
35 C21 C C27 N N N 0 3.525 -5.229 -0.046
36 C20 C C28 N N N 0 2.46 -4.575 0.402
37 C19 C C29 N N N 0 1.191 -4.63 -0.347
38 C18 C C30 N N N 0 0.149 -3.932 0.082
39 C1C C C32 N N N 0 -0.889 -3.729 -2.151
40 C17 C C31 R N N 0 -1.168 -3.904 -0.657
41 C1D C C33 N N N 0 -0.057 -2.464 -2.37
42 C16 C C34 N N N 0 -1.978 -2.711 -0.144
43 C15 C C35 N N N 0 -3.336 -2.593 -0.824
44 C13 C C36 S N N 0 -3.938 -1.217 -0.54
45 C7 C C38 N N N 0 -7.257 0.143 -1.449
46 O14 O O9 N N N 0 -5.218 -1.083 -1.162
47 C8 C C37 S N N 0 -5.9 0.12 -0.79
48 O9 O O10 N N N 0 -6.06 0.158 0.631
49 C6 C C39 N N N 0 -8.398 -0.652 -0.867
50 O7 O O11 N N N 0 -7.436 0.791 -2.46
51 C5 C C40 S N N 0 -8.359 -0.601 0.659
52 C51 C C41 N N N 0 -8.833 0.77 1.142
53 C4 C C42 S N N 0 -6.93 -0.853 1.145
54 C3 C C43 N N N 0 -6.904 -0.812 2.675
55 C2 C C44 R N N 0 -5.507 -1.187 3.172
56 C1 C C45 N N N 0 -5.446 -1.025 4.692
57 O2 O O12 N N N 0 -5.226 -2.545 2.826
58 H1 H H1 N N N 0 -5.762 2.556 0.412
59 H2 H H2 N N N 0 -5.167 3.477 -0.99
60 H3 H H3 N N N 0 -6.761 2.687 -1.056
61 H4 H H4 N N N 0 -5.077 1.395 -2.321
62 H5 H H5 N N N 0 -3.68 1.364 0.389
63 H6 H H6 N N N 0 -2.057 -0.169 -0.563
64 H7 H H7 N N N 0 -3.821 -0.121 -3.051
65 H8 H H8 N N N 0 -2.201 0.602 -2.907
66 H9 H H9 N N N 0 -2.399 -1.164 -2.808
67 H10 H H10 N N N 0 -0.973 4.157 -1.991
68 H11 H H11 N N N 0 0.186 3.717 0.794
69 H12 H H12 N N N 0 0.741 6.159 -0.495
70 H13 H H13 N N N 0 0.676 5.102 -2.712
71 H14 H H14 N N N 0 2.309 5.717 -2.36
72 H15 H H15 N N N 0 1.968 3.974 -2.236
73 H16 H H16 N N N 0 3.138 5.84 -0.045
74 H17 H H17 N N N 0 1.638 6.184 1.765
75 H18 H H18 N N N 0 2.76 3.185 -0.726
76 H19 H H19 N N N 0 1.559 2.757 1.386
77 H20 H H20 N N N 0 3.107 1.88 1.353
78 H21 H H21 N N N 0 2.95 3.372 2.31
79 H22 H H22 N N N 0 6.261 3.22 -0.927
80 H23 H H23 N N N 0 4.294 2.251 -1.984
81 H24 H H24 N N N 0 5.394 0.949 -1.473
82 H25 H H25 N N N 0 3.928 1.298 -0.526
83 H26 H H26 N N N 0 7.009 2.822 1.228
84 H27 H H27 N N N 0 4.975 2.698 2.347
85 H31 H H31 N N N 0 7.062 0.857 -1.587
86 H28 H H28 N N N 0 7.75 0.671 1.362
87 H29 H H29 N N N 0 8.273 1.881 -0.779
88 H30 H H30 N N N 0 8.484 0.114 -0.815
89 H32 H H32 N N N 0 7.836 -3.24 1.408
90 H33 H H33 N N N 0 8.351 -1.547 1.6
91 H34 H H34 N N N 0 6.923 -2.148 2.477
92 H35 H H35 N N N 0 8.198 -1.446 -0.81
93 H36 H H36 N N N 0 4.852 -2.72 1.246
94 H37 H H37 N N N 0 3.716 -2.829 -0.857
95 H38 H H38 N N N 0 6.81 -4.39 0.327
96 H39 H H39 N N N 0 4.705 -4.265 -1.873
97 H40 H H40 N N N 0 6.399 -3.745 -2.037
98 H41 H H41 N N N 0 6.019 -5.458 -1.738
99 H42 H H42 N N N 0 5.289 -6.151 0.715
100 H43 H H43 N N N 0 4.663 -4.817 1.706
101 H44 H H44 N N N 0 3.438 -5.827 -0.942
102 H45 H H45 N N N 0 2.52 -4.007 1.313
103 H46 H H46 N N N 0 1.135 -5.249 -1.232
104 H47 H H47 N N N 0 0.24 -3.381 1.009
105 H48 H H48 N N N 0 -1.712 -4.829 -0.489
106 H49 H H49 N N N 0 -0.338 -4.595 -2.521
107 H50 H H50 N N N 0 -1.832 -3.642 -2.689
108 H51 H H51 N N N 0 0.888 -2.553 -1.834
109 H52 H H52 N N N 0 0.14 -2.339 -3.435
110 H53 H H53 N N N 0 -0.606 -1.599 -1.998
111 H54 H H54 N N N 0 -2.133 -2.833 0.935
112 H55 H H55 N N N 0 -1.399 -1.803 -0.305
113 H56 H H56 N N N 0 -3.263 -2.753 -1.898
114 H57 H H57 N N N 0 -4.01 -3.358 -0.415
115 H58 H H58 N N N 0 -4.068 -1.108 0.54
116 H59 H H59 N N N 0 -9.344 -0.235 -1.218
117 H60 H H60 N N N 0 -8.324 -1.691 -1.2
118 H61 H H61 N N N 0 -9.019 -1.375 1.062
119 H62 H H62 N N N 0 -9.854 0.942 0.801
120 H63 H H63 N N N 0 -8.804 0.802 2.231
121 H64 H H64 N N N 0 -8.18 1.544 0.738
122 H65 H H65 N N N 0 -6.6 -1.836 0.805
123 H66 H H66 N N N 0 -7.154 0.193 3.016
124 H67 H H67 N N N 0 -7.633 -1.52 3.07
125 H68 H H68 N N N 0 -4.768 -0.533 2.707
126 H69 H H69 N N N 0 -6.184 -1.679 5.157
127 H70 H H70 N N N 0 -4.45 -1.292 5.047
128 H71 H H71 N N N 0 -5.66 0.01 4.957
129 H72 H H72 N N N 0 -5.845 -3.183 3.206