Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : EII

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 60


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C15 C C1 N N N 0 -0.96 1.041 0.209
2 C11 C C2 N Y N 0 3.813 1.262 -0.742
3 C10 C C3 N Y N 0 3.553 2.019 -1.875
4 C13 C C4 N N N 0 1.467 1.208 -0.359
5 C14 C C5 N N N 0 0.454 0.647 0.641
6 C02 C C6 N N N 0 5.569 -2.191 1.709
7 C04 C C7 N N N 0 5.283 -1.369 0.479
8 C05 C C8 N N N 0 5.406 0.118 0.82
9 C06 C C9 N Y N 0 5.121 0.941 -0.41
10 C07 C C10 N Y N 0 6.161 1.376 -1.208
11 C08 C C11 N Y N 0 5.9 2.131 -2.336
12 C09 C C12 N Y N 0 4.597 2.451 -2.67
13 C17 C C13 N Y N 0 -3.221 0.779 0.904
14 C18 C C14 N Y N 0 -3.829 1.929 1.423
15 C21 C C15 N Y N 0 -5.812 1.296 0.432
16 C24 C C16 N Y N 0 -3.987 -0.082 0.138
17 C25 C C17 N N N 0 -3.376 -1.33 -0.446
18 C26 C C18 N N N 0 -4.119 -2.558 0.085
19 C27 C C19 N N N 0 -3.499 -3.825 -0.508
20 C28 C C20 N N N 0 -3.612 -3.781 -2.033
21 C29 C C21 N N N 0 -2.87 -2.554 -2.565
22 C30 C C22 N N N 0 -3.489 -1.287 -1.972
23 N19 N N1 N N N 0 -3.1 2.825 2.192
24 N20 N N2 N Y N 0 -5.114 2.149 1.166
25 N22 N N3 N N N 0 -7.151 1.558 0.184
26 N23 N N4 N Y N 0 -5.264 0.204 -0.076
27 O01 O O1 N N N 0 5.842 -1.645 2.751
28 O03 O O2 N N N 0 5.519 -3.531 1.646
29 O12 O O3 N N N 0 2.788 0.84 0.044
30 O16 O O4 N N N 0 -1.907 0.517 1.143
31 H1 H H1 N N N 0 -1.042 2.127 0.18
32 H2 H H2 N N N 0 -1.164 0.634 -0.781
33 H3 H H3 N N N 0 2.536 2.27 -2.136
34 H4 H H4 N N N 0 1.263 0.801 -1.349
35 H5 H H5 N N N 0 1.385 2.294 -0.389
36 H6 H H6 N N N 0 0.658 1.054 1.632
37 H7 H H7 N N N 0 0.535 -0.439 0.671
38 H8 H H8 N N N 0 5.999 -1.622 -0.303
39 H9 H H9 N N N 0 4.273 -1.579 0.128
40 H10 H H10 N N N 0 4.69 0.372 1.601
41 H11 H H11 N N N 0 6.417 0.328 1.171
42 H12 H H12 N N N 0 7.18 1.126 -0.95
43 H13 H H13 N N N 0 6.715 2.47 -2.958
44 H14 H H14 N N N 0 4.396 3.041 -3.552
45 H15 H H15 N N N 0 -2.326 -1.388 -0.161
46 H16 H H16 N N N 0 -4.038 -2.588 1.172
47 H17 H H17 N N N 0 -5.169 -2.499 -0.2
48 H18 H H18 N N N 0 -2.449 -3.883 -0.223
49 H19 H H19 N N N 0 -4.028 -4.699 -0.129
50 H20 H H20 N N N 0 -3.17 -4.684 -2.456
51 H21 H H21 N N N 0 -4.662 -3.723 -2.318
52 H22 H H22 N N N 0 -1.819 -2.612 -2.28
53 H23 H H23 N N N 0 -2.95 -2.523 -3.651
54 H24 H H24 N N N 0 -4.54 -1.228 -2.257
55 H25 H H25 N N N 0 -2.961 -0.412 -2.351
56 H26 H H26 N N N 0 -2.163 2.657 2.374
57 H27 H H27 N N N 0 -3.529 3.619 2.547
58 H28 H H28 N N N 0 -7.673 0.943 -0.355
59 H29 H H29 N N N 0 -7.565 2.355 0.55
60 H30 H H30 N N N 0 5.709 -4.016 2.461