Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : EJP

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 53


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -8.983 1.562 -0.235
2 N3 N N2 N Y N 0 3.758 0.809 -0.872
3 C4 C C1 N Y N 0 6.411 -2.734 -0.32
4 C5 C C2 N Y N 0 -6.473 -0.177 1.444
5 C6 C C3 N Y N 0 6.454 -0.151 0.665
6 C7 C C4 N Y N 0 5.799 -1.715 -1.025
7 C8 C C5 N Y N 0 -5.286 -0.842 1.662
8 C10 C C6 N Y N 0 -6.771 0.324 0.174
9 C13 C C7 N Y N 0 -4.381 -1.008 0.623
10 C15 C C8 N Y N 0 1.66 0.512 -0.808
11 C17 C C9 N N N 0 0.25 0.115 -1.006
12 C20 C C10 N N N 0 -0.382 2.04 0.407
13 C21 C C11 N N N 0 -2.617 0.175 -1.641
14 C22 C C12 S N N 0 -2.04 0.266 -0.23
15 C24 C C13 N N N 0 5.153 0.688 -1.302
16 C1 C C14 N N N 0 -8.005 1.014 -0.054
17 C2 C C15 N Y N 0 7.045 -2.462 0.878
18 C3 C C16 N Y N 0 7.066 -1.17 1.37
19 C9 C C17 N Y N 0 -5.861 0.153 -0.874
20 C11 C C18 N Y N 0 2.001 1.436 0.225
21 C12 C C19 N Y N 0 5.82 -0.423 -0.533
22 C14 C C20 N Y N 0 -4.667 -0.501 -0.646
23 C16 C C21 N Y N 0 3.325 1.601 0.141
24 C18 C C22 N N N 0 -2.02 -1.128 0.408
25 C19 C C23 N N N 0 0.958 2.008 1.143
26 C23 C C24 N N N 0 -3.166 -2.984 1.51
27 N2 N N3 N Y N 0 2.764 0.182 -1.408
28 N4 N N4 N N N 0 -3.176 -1.684 0.834
29 N5 N N5 N N N 0 -0.677 0.799 -0.296
30 O1 O O1 N N N 0 -0.061 -0.779 -1.769
31 O2 O O2 N N N 0 -0.973 -1.73 0.526
32 O3 O O3 N N N 0 -3.77 -0.663 -1.655
33 CL1 CL CL1 N N N 0 4.303 2.631 1.139
34 H1 H H1 N N N 0 6.39 -3.743 -0.703
35 H2 H H2 N N N 0 -7.176 -0.047 2.253
36 H3 H H3 N N N 0 6.472 0.858 1.05
37 H4 H H4 N N N 0 5.303 -1.927 -1.961
38 H5 H H5 N N N 0 -5.06 -1.235 2.643
39 H6 H H6 N N N 0 -1.175 2.23 1.13
40 H7 H H7 N N N 0 -0.365 2.855 -0.317
41 H8 H H8 N N N 0 -2.891 1.173 -1.984
42 H9 H H9 N N N 0 -1.865 -0.239 -2.312
43 H10 H H10 N N N 0 -2.658 0.932 0.371
44 H11 H H11 N N N 0 5.187 0.463 -2.368
45 H12 H H12 N N N 0 5.675 1.626 -1.111
46 H13 H H13 N N N 0 7.523 -3.258 1.429
47 H14 H H14 N N N 0 7.561 -0.957 2.306
48 H15 H H15 N N N 0 -6.088 0.539 -1.857
49 H16 H H16 N N N 0 1.241 3.02 1.432
50 H17 H H17 N N N 0 0.872 1.383 2.032
51 H18 H H18 N N N 0 -3.27 -3.779 0.771
52 H19 H H19 N N N 0 -2.225 -3.108 2.046
53 H20 H H20 N N N 0 -3.995 -3.033 2.216