Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : EZC

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 50


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N N N 0 2.564 1.19 2.381
2 C13 C C2 N N N 0 4.924 1.845 2.053
3 C15 C C3 N N N 0 1.996 0.313 -0.362
4 C17 C C4 N Y N 0 0.528 0.346 -0.326
5 C20 C C5 N N N 0 3.157 -3.628 -1.705
6 C21 C C6 N Y N 0 -0.377 1.104 -1.092
7 C22 C C7 N Y N 0 -2.21 0.094 0.077
8 C24 C C8 N N N 0 2.274 -4.317 -2.748
9 C26 C C9 N N N 0 -5.473 -0.962 1.361
10 C07 C C10 R N N 0 2.47 -0.679 0.673
11 C08 C C11 N N N 0 3.338 0.022 1.72
12 C09 C C12 N N N 0 4.535 0.74 1.049
13 C11 C C13 N N N 0 1.193 -1.23 1.322
14 C12 C C14 N N N 0 3.255 -1.81 0.005
15 C14 C C15 N N N 0 3.671 2.131 2.9
16 C16 C C16 N Y N 0 0.038 -0.537 0.639
17 C18 C C17 N N N 0 2.372 -2.498 -1.038
18 C19 C C18 N Y N 0 -1.321 -0.659 0.836
19 C23 C C19 N Y N 0 -1.732 0.974 -0.888
20 C25 C C20 N N N 0 -3.968 -0.957 1.282
21 O03 O O1 N N N 0 2.704 0.965 -1.099
22 O04 O O2 N N N 0 -3.546 -0.033 0.277
23 O05 O O3 N N N 0 -6.118 -0.248 0.631
24 O06 O O4 N N N 0 -6.096 -1.76 2.242
25 CL1 CL CL1 N N N 0 0.216 2.206 -2.296
26 CL2 CL CL2 N N N 0 -2.846 1.91 -1.835
27 H1 H H1 N N N 0 1.944 1.702 1.645
28 H2 H H2 N N N 0 1.953 0.825 3.206
29 H3 H H3 N N N 0 5.736 1.498 2.693
30 H4 H H4 N N N 0 5.228 2.745 1.519
31 H5 H H5 N N N 0 3.461 -4.354 -0.951
32 H6 H H6 N N N 0 4.042 -3.218 -2.192
33 H7 H H7 N N N 0 2.834 -5.122 -3.223
34 H8 H H8 N N N 0 1.39 -4.727 -2.261
35 H9 H H9 N N N 0 1.97 -3.591 -3.502
36 H10 H H10 N N N 0 3.681 -0.688 2.472
37 H11 H H11 N N N 0 4.232 1.179 0.098
38 H12 H H12 N N N 0 5.363 0.047 0.904
39 H13 H H13 N N N 0 1.128 -2.307 1.167
40 H14 H H14 N N N 0 1.188 -1.003 2.389
41 H15 H H15 N N N 0 4.14 -1.399 -0.482
42 H16 H H16 N N N 0 3.559 -2.535 0.76
43 H17 H H17 N N N 0 3.367 3.17 2.777
44 H18 H H18 N N N 0 3.875 1.923 3.95
45 H19 H H19 N N N 0 2.068 -1.772 -1.792
46 H20 H H20 N N N 0 1.487 -2.908 -0.551
47 H21 H H21 N N N 0 -1.697 -1.342 1.583
48 H22 H H22 N N N 0 -3.555 -0.659 2.246
49 H23 H H23 N N N 0 -3.614 -1.956 1.029
50 H24 H H24 N N N 0 -7.062 -1.729 2.256