Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : EZR

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 61


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C4 N Y N 0 -5.676 -0.389 -1.229
2 C5 C C5 N Y N 0 5.21 -2.779 0.259
3 C6 C C6 N Y N 0 5.788 -0.454 0.082
4 C7 C C7 N Y N 0 -6.911 0.216 -1.319
5 C8 C C8 N Y N 0 -3.321 -1.952 -0.092
6 C10 C C10 N Y N 0 -0.912 -1.761 -0.029
7 C13 C C13 N Y N 0 3.469 -1.111 0.061
8 C15 C C15 N Y N 0 -2.072 -2.557 0.001
9 C17 C C17 N Y N 0 -7.225 1.292 -0.495
10 C20 C C20 N Y N 0 1.652 -2.313 0.102
11 C21 C C21 N N N 0 4.562 2.022 1.026
12 C22 C C22 N N N 0 4.564 1.797 -1.384
13 C24 C C24 N N N 0 4.07 3.24 -1.519
14 C26 C C26 N N N 0 -4.532 2.726 2.229
15 C1 C C1 N Y N 0 6.163 -1.784 0.206
16 C2 C C2 N Y N 0 -1.019 -0.373 -0.15
17 C3 C C3 N Y N 0 -2.248 0.211 -0.24
18 C9 C C9 N Y N 0 -6.295 1.762 0.423
19 C11 C C11 N Y N 0 -3.409 -0.572 -0.211
20 C12 C C12 N Y N 0 -4.738 0.077 -0.31
21 C14 C C14 N Y N 0 3.861 -2.453 0.187
22 C16 C C16 N Y N 0 4.451 -0.108 0.008
23 C18 C C18 N Y N 0 -5.053 1.159 0.519
24 C19 C C19 N Y N 0 0.223 -2.684 0.086
25 C23 C C23 N N N 0 4.067 3.464 0.891
26 C25 C C25 N N N 0 6.017 4.125 -0.384
27 N27 N N27 N Y N 0 2.115 -1.089 0.014
28 N28 N N28 N Y N 0 -0.264 -3.901 0.174
29 N29 N N29 N Y N 0 2.695 -3.195 0.211
30 N30 N N30 N Y N 0 -1.661 -3.86 0.124
31 N31 N N31 N N N 0 4.08 1.233 -0.117
32 N32 N N32 N N N 0 -8.477 1.901 -0.592
33 N33 N N33 N N N 0 4.551 4.028 -0.377
34 O34 O O34 N N N 0 -4.141 1.618 1.416
35 H4 H H4 N N N 0 -5.437 -1.227 -1.867
36 H5 H H5 N N N 0 5.512 -3.812 0.352
37 H6 H H6 N N N 0 6.545 0.315 0.042
38 H7 H H7 N N N 0 -7.638 -0.146 -2.032
39 H8 H H8 N N N 0 -4.218 -2.553 -0.075
40 H21 H H21 N N N 0 5.651 2.011 1.042
41 H21A H H21A N N N 0 4.18 1.591 1.952
42 H22 H H22 N N N 0 4.184 1.204 -2.216
43 H22A H H22A N N N 0 5.654 1.784 -1.396
44 H24 H H24 N N N 0 4.451 3.67 -2.445
45 H24A H H24A N N N 0 2.98 3.251 -1.535
46 H26 H H26 N N N 0 -3.715 2.991 2.899
47 H26A H H26A N N N 0 -4.77 3.578 1.592
48 H26B H H26B N N N 0 -5.41 2.455 2.816
49 H1 H H1 N N N 0 7.21 -2.042 0.262
50 H2 H H2 N N N 0 -0.128 0.238 -0.172
51 H3 H H3 N N N 0 -2.326 1.284 -0.333
52 H9 H H9 N N N 0 -6.541 2.598 1.061
53 H23 H H23 N N N 0 2.977 3.477 0.903
54 H23A H H23A N N N 0 4.448 4.058 1.722
55 H25 H H25 N N N 0 6.345 4.608 -1.305
56 H25A H H25A N N N 0 6.347 4.714 0.472
57 H25B H H25B N N N 0 6.448 3.125 -0.325
58 HN29 H HN29 N N N 0 2.628 -4.159 0.29
59 HN30 H HN30 N N N 0 -2.246 -4.632 0.171
60 HN32 H HN32 N N N 0 -9.127 1.574 -1.233
61 HN3A H HN3A N N N 0 -8.696 2.652 -0.018