Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : F2T

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 33


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 P P P1 N N N 0 -4.096 -0.541 0.367
2 SP1 S S1 N N N 0 -3.828 -2.231 -0.885
3 OP2 O O1 N N N 0 -5.043 0.4 -0.272
4 O5' O O2 N N N 0 -2.68 0.192 0.589
5 C5' C C1 N N N 0 -1.952 0.818 -0.47
6 C4' C C2 R N N 0 -0.657 1.414 0.084
7 O4' O O3 N N N 0 0.232 0.369 0.535
8 C3' C C3 R N N 0 0.148 2.112 -1.042
9 O3' O O4 N N N 0 -0.283 3.463 -1.215
10 C2' C C4 R N N 0 1.593 2.06 -0.488
11 F2' F F1 N N N 0 1.927 3.273 0.123
12 C1' C C5 R N N 0 1.558 0.924 0.553
13 N1 N N1 N N N 0 2.535 -0.108 0.198
14 C2 C C6 N N N 0 3.578 -0.348 1.013
15 O2 O O5 N N N 0 3.697 0.296 2.038
16 N3 N N2 N N N 0 4.49 -1.29 0.711
17 C4 C C7 N N N 0 4.371 -2.013 -0.421
18 C6 C C9 N N N 0 2.375 -0.823 -0.958
19 O4 O O6 N N N 0 5.196 -2.866 -0.696
20 C5 C C8 N N N 0 3.278 -1.771 -1.288
21 H5' H H1 N N N 0 -1.714 0.078 -1.234
22 H5'' H H2 N N N 0 -2.558 1.61 -0.908
23 H4' H H3 N N N 0 -0.872 2.111 0.894
24 H3' H H4 N N N 0 0.07 1.558 -1.977
25 HO3' H H5 N N Y 0 0.191 3.942 -1.908
26 H2' H H6 N N N 0 2.299 1.828 -1.285
27 H1' H H7 N N N 0 1.78 1.322 1.544
28 H3 H H8 N N N 0 5.236 -1.45 1.31
29 H5 H H9 N N N 0 3.167 -2.339 -2.2
30 H6 H H10 N N N 0 1.532 -0.628 -1.605
31 OP3 O O7 N N Y 0 -4.685 -1.013 1.788
32 H11 H H11 N N N 0 -5.071 -2.736 -0.982
33 HOP3 H H12 N N Y 0 -4.115 -1.633 2.264