Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : F3Y

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 50


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 8.445 -3.105 -0.002
2 C2 C C2 N N N 0 6.916 -3.077 -0.043
3 C3 C C3 N N N 0 6.433 -1.625 -0.073
4 C4 C C4 N N N 0 4.904 -1.596 -0.113
5 C5 C C5 N N N 0 4.422 -0.145 -0.144
6 O6 O O1 N N N 0 2.994 -0.118 -0.181
7 C7 C C6 N Y N 0 2.4 1.105 -0.212
8 C8 C C7 N Y N 0 3.178 2.254 -0.205
9 C9 C C8 N Y N 0 2.576 3.498 -0.235
10 C10 C C9 N Y N 0 1.199 3.601 -0.273
11 C11 C C10 N Y N 0 0.415 2.453 -0.28
12 N12 N N1 N N N 0 -0.977 2.557 -0.318
13 C13 C C11 N Y N 0 -1.769 1.547 0.234
14 C14 C C12 N Y N 0 -1.319 0.839 1.342
15 C15 C C13 N Y N 0 -2.101 -0.16 1.888
16 C16 C C14 N Y N 0 -3.332 -0.458 1.336
17 C17 C C15 N Y N 0 -3.787 0.246 0.229
18 N18 N N2 N N N 0 -5.037 -0.052 -0.326
19 C19 C C16 N N N 0 -5.492 -1.321 -0.318
20 O20 O O2 N N N 0 -4.781 -2.218 0.085
21 C21 C C17 N N N 0 -6.884 -1.626 -0.81
22 C22 C C18 N N N 0 -7.148 -3.128 -0.694
23 C23 C C19 N Y N 0 -3.008 1.254 -0.319
24 C24 C C20 N Y N 0 1.018 1.204 -0.255
25 H1 H H1 N N N 0 8.794 -2.588 0.891
26 H2 H H2 N N N 0 8.788 -4.14 0.019
27 H3 H H3 N N N 0 8.841 -2.609 -0.888
28 H4 H H4 N N N 0 6.566 -3.594 -0.936
29 H5 H H5 N N N 0 6.519 -3.573 0.843
30 H6 H H6 N N N 0 6.783 -1.107 0.821
31 H7 H H7 N N N 0 6.83 -1.129 -0.959
32 H8 H H8 N N N 0 4.555 -2.114 -1.007
33 H9 H H9 N N N 0 4.508 -2.092 0.772
34 H10 H H10 N N N 0 4.772 0.373 0.75
35 H11 H H11 N N N 0 4.819 0.352 -1.029
36 H12 H H12 N N N 0 4.254 2.177 -0.176
37 H13 H H13 N N N 0 3.183 4.391 -0.229
38 H14 H H14 N N N 0 0.731 4.574 -0.296
39 H16 H H16 N N N 0 -0.357 1.069 1.776
40 H15 H H15 N N N 0 -1.395 3.331 -0.728
41 H17 H H17 N N N 0 -1.75 -0.71 2.749
42 H18 H H18 N N N 0 -3.941 -1.24 1.766
43 H19 H H19 N N N 0 -5.575 0.653 -0.717
44 H20 H H20 N N N 0 -7.609 -1.082 -0.206
45 H21 H H21 N N N 0 -6.976 -1.319 -1.852
46 H22 H H22 N N N 0 -8.154 -3.348 -1.05
47 H23 H H23 N N N 0 -6.422 -3.672 -1.298
48 H24 H H24 N N N 0 -7.056 -3.434 0.348
49 H25 H H25 N N N 0 -3.36 1.803 -1.18
50 H26 H H26 N N N 0 0.412 0.31 -0.265