Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : FKD

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 34


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O2 O O2 N N Y 0 1.336 0.928 1.823
2 C1 C C1 N N N 0 1.819 2.197 -0.153
3 F1 F F1 N N N 0 2.44 -0.248 -1.437
4 C2 C C2 R N N 0 1.375 0.865 0.396
5 C3 C C3 R N N 0 2.362 -0.221 -0.04
6 C4 C C4 R N N 0 1.872 -1.579 0.471
7 O4 O O4 N N N 0 2.748 -2.609 0.006
8 C5 C C5 R N N 0 0.458 -1.832 -0.059
9 O5 O O5 N N N 0 -0.037 -3.065 0.469
10 C6 C C6 S N N 0 -0.455 -0.684 0.378
11 O6 O O6 N N N 0 0.073 0.553 -0.104
12 C7 C C7 R N N 0 -1.857 -0.898 -0.197
13 O7 O O7 N N N 0 -1.771 -1.05 -1.616
14 C8 C C8 R N N 0 -2.735 0.31 0.135
15 O8 O O8 N N N 0 -2.82 0.461 1.553
16 O1B O O1B N N N 0 3.057 2.649 0.101
17 C9 C C9 N N N 0 -4.136 0.095 -0.441
18 O9 O O9 N N N 0 -4.922 1.271 -0.233
19 O1A O O1A N N N 0 1.06 2.857 -0.822
20 HO2 H HO2 N N Y 0 0.73 1.596 2.171
21 H31 H H3 N N N 0 3.347 -0.007 0.376
22 H4 H H4 N N N 0 1.86 -1.576 1.561
23 HO4 H HO4 N N Y 0 3.664 -2.508 0.298
24 H8 H H8 N N N 0 -2.297 1.208 -0.301
25 H5 H H5 N N N 0 0.48 -1.885 -1.147
26 HO5 H HO5 N N Y 0 0.497 -3.836 0.234
27 H6 H H6 N N N 0 -0.51 -0.657 1.467
28 H7 H H7 N N N 0 -2.295 -1.796 0.238
29 HO7 H HO7 N N Y 0 -1.39 -0.286 -2.07
30 HO8 H HO8 N N Y 0 -3.202 -0.302 2.008
31 H91 H H9 N N N 0 -4.063 -0.108 -1.509
32 H92 H H9A N N N 0 -4.608 -0.751 0.059
33 HO9 H HO9 N N Y 0 -5.824 1.206 -0.573
34 HO1B H HO1B N N N 0 3.296 3.508 -0.272