Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : G6N

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 97


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C2 C C1 R N N 0 -0.992 -3.23 -1.51
2 C4 C C2 R N N 0 -1.393 -1.208 -0.103
3 C5 C C3 R N N 0 -3.1 -1.901 -1.638
4 C6 C C4 N N N 0 -4.619 -1.977 -1.809
5 C7 C C5 N N N 0 1.22 -2.385 1.305
6 C8 C C6 N N N 0 2.705 -2.234 1.512
7 C9 C C7 R N N 0 -0.783 1.019 -0.748
8 C10 C C8 N N N 0 -2.023 1.712 -1.314
9 C11 C C9 S N N 0 0.475 1.668 -1.329
10 C12 C C10 N N N 0 -7.048 1.51 0.306
11 O14 O O1 N N N 0 5.764 2.969 -0.934
12 C15 C C11 S N N 0 1.715 0.975 -0.764
13 C16 C C12 N N N 0 2.973 1.624 -1.345
14 C17 C C13 N N N 0 8.076 1.023 -0.139
15 C18 C C14 R N N 0 8.77 0.144 0.904
16 C19 C C15 S N N 0 10.252 0.516 0.982
17 C20 C C16 S N N 0 10.945 -0.363 2.024
18 O21 O O2 N N N 0 13.049 -0.728 3.155
19 C1 C C17 S N N 0 -2.504 -3.307 -1.742
20 C3 C C18 R N N 0 -0.728 -2.586 -0.145
21 O1 O O3 N N N 0 -2.792 -1.347 -0.357
22 O2 O O4 N N N 0 -0.809 -0.366 -1.099
23 N1 N N1 N N N 0 0.716 -2.439 0.056
24 O3 O O5 N N N 0 -0.437 -4.547 -1.532
25 O4 O O6 N N N 0 -2.761 -3.839 -3.043
26 O5 O O7 N N N 0 -5.161 -0.655 -1.846
27 O6 O O8 N N N 0 0.479 -2.457 2.262
28 O7 O O9 N N N 0 -3.191 1.198 -0.671
29 P1 P P1 N N N 0 -4.617 1.944 -0.716
30 O8 O O10 N N N 0 -5.707 1.068 0.082
31 C13 C C19 S N N 0 -7.774 0.501 1.199
32 C14 C C20 N N N 0 -9.167 1.034 1.541
33 O9 O O11 N N N 0 0.501 3.053 -0.978
34 O10 O O12 N N N 0 4.131 1.056 -0.73
35 P2 P P2 N N N 0 5.631 1.505 -1.102
36 O11 O O13 N N N 0 6.673 0.756 -0.129
37 O12 O O14 N N N 0 5.946 1.11 -2.631
38 O13 O O15 N N N 0 -5.084 2.115 -2.248
39 C21 C C21 N N N 0 12.427 0.01 2.102
40 O15 O O16 N N N 0 -4.497 3.277 -0.085
41 O16 O O17 N N N 0 1.689 -0.41 -1.115
42 O17 O O18 N N N 0 -7.896 -0.744 0.509
43 O18 O O19 N N N 0 8.643 -1.23 0.529
44 O19 O O20 N N N 0 10.818 -1.736 1.649
45 O20 O O21 N N N 0 10.378 1.89 1.357
46 H1 H H1 N N N 0 -0.531 -2.627 -2.293
47 H2 H H2 N N N 0 -1.245 -0.763 0.881
48 H3 H H3 N N N 0 -2.678 -1.268 -2.418
49 H4 H H4 N N N 0 -4.854 -2.492 -2.74
50 H5 H H5 N N N 0 -5.052 -2.523 -0.971
51 H6 H H6 N N N 0 2.923 -2.209 2.579
52 H7 H H7 N N N 0 3.223 -3.077 1.055
53 H8 H H8 N N N 0 3.044 -1.306 1.05
54 H9 H H9 N N N 0 -0.774 1.118 0.338
55 H10 H H10 N N N 0 -1.953 2.785 -1.135
56 H11 H H11 N N N 0 -2.087 1.526 -2.386
57 H12 H H12 N N N 0 0.466 1.569 -2.415
58 H13 H H13 N N N 0 -7.032 2.483 0.796
59 H14 H H14 N N N 0 -7.568 1.59 -0.648
60 H15 H H15 N N N 0 1.724 1.074 0.322
61 H16 H H16 N N N 0 3.009 1.448 -2.42
62 H17 H H17 N N N 0 2.949 2.697 -1.153
63 H18 H H18 N N N 0 8.248 2.073 0.099
64 H19 H H19 N N N 0 8.481 0.803 -1.127
65 H20 H H20 N N N 0 8.304 0.299 1.877
66 H21 H H21 N N N 0 10.717 0.361 0.008
67 H22 H H22 N N N 0 10.48 -0.208 2.997
68 H23 H H23 N N N 0 13.992 -0.542 3.262
69 H24 H H24 N N N 0 -2.956 -3.951 -0.988
70 H25 H H25 N N N 0 -1.144 -3.216 0.641
71 H26 H H26 N N N 0 1.309 -2.382 -0.71
72 H27 H H27 N N N 0 -0.568 -5.014 -2.368
73 H28 H H28 N N N 0 -3.701 -3.912 -3.259
74 H29 H H29 N N N 0 -6.126 -0.627 -1.888
75 H30 H H30 N N N 0 -7.206 0.354 2.117
76 H31 H H31 N N N 0 -9.735 1.181 0.623
77 H34 H H34 N N N 0 0.51 3.217 -0.025
78 H35 H H35 N N N 0 5.878 0.163 -2.815
79 H36 H H36 N N N 0 -5.212 1.279 -2.716
80 H37 H H37 N N N 0 12.911 -0.228 1.155
81 H38 H H38 N N N 0 12.523 1.077 2.301
82 H39 H H39 N N N 0 1.68 -0.574 -2.068
83 H40 H H40 N N N 0 -8.392 -0.688 -0.319
84 H41 H H41 N N N 0 9.036 -1.441 -0.329
85 H42 H H42 N N N 0 11.211 -1.947 0.791
86 H43 H H43 N N N 0 9.985 2.101 2.215
87 C23 C C23 N N N 0 -9.893 0.026 2.434
88 C24 C C24 N N N 0 -11.286 0.558 2.776
89 O22 O O22 N N N 0 -9.044 2.279 2.231
90 O23 O O23 N N N 0 -10.015 -1.22 1.744
91 O24 O O24 N N N 0 -11.92 -0.326 3.703
92 H32 H H32 N N N 0 -9.325 -0.122 3.352
93 H33 H H33 N N N 0 -11.197 1.548 3.222
94 H44 H H44 N N N 0 -11.884 0.622 1.867
95 H45 H H45 N N N 0 -8.549 2.223 3.059
96 H46 H H46 N N N 0 -10.511 -1.164 0.916
97 H47 H H47 N N N 0 -12.809 -0.051 3.965