Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : G84

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 109


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 9.237 0.646 -0.605
2 C2 C C2 N Y N 0 8.585 -0.562 -0.372
3 C3 C C3 N N N 0 -8.821 4.926 -1.73
4 C4 C C4 N N N 0 7.332 -0.258 0.412
5 C5 C C5 N N N 0 -8.634 5.941 -2.86
6 C6 C C6 N Y N 0 7.317 1.237 0.611
7 C7 C C7 N Y N 0 1.649 2.907 0.282
8 C8 C C8 N Y N 0 8.457 1.753 0.0
9 C9 C C9 N Y N 0 1.657 3.617 1.468
10 C10 C C10 N Y N 0 10.435 0.65 -1.322
11 C11 C C11 N Y N 0 0.491 3.758 2.197
12 C12 C C12 N N N 0 0.616 -5.416 -0.055
13 C13 C C13 N N N 0 6.097 -0.697 -0.379
14 C14 C C14 N N N 0 1.232 -2.898 1.828
15 C15 C C15 N Y N 0 10.961 -0.536 -1.791
16 O15 O O15 N N N 0 4.91 -0.507 0.434
17 C16 C C16 N Y N 0 10.306 -1.731 -1.555
18 C17 C C17 N N N 0 3.73 -0.847 -0.119
19 C18 C C18 N Y N 0 9.121 -1.743 -0.84
20 C19 C C19 N Y N 0 8.69 3.129 0.038
21 O19 O O19 N N N 0 3.694 -1.29 -1.25
22 C20 C C20 N Y N 0 7.795 3.963 0.675
23 C21 C C21 N Y N 0 6.665 3.441 1.28
24 N21 N N21 N N N 0 2.589 -0.697 0.583
25 O27 O O27 N N N 0 -0.105 -3.112 -0.174
26 C22 C C22 N Y N 0 6.427 2.078 1.247
27 C23 C C23 S N N 0 1.319 -1.17 0.026
28 C25 C C25 R N N 0 1.159 -2.663 0.318
29 C29 C C29 N N N 0 -0.04 -4.333 -0.914
30 C31 C C31 N N N 0 0.18 -0.41 0.656
31 N33 N N33 N N N 0 -1.029 -0.393 0.061
32 O35 O O35 N N N 0 0.352 0.185 1.698
33 C37 C C37 S N N 0 -2.102 0.443 0.605
34 C39 C C39 N N N 0 -3.437 -0.131 0.207
35 C41 C C41 N N N 0 -1.972 1.864 0.052
36 C43 C C43 N N N 0 0.787 -4.117 -2.182
37 C45 C C45 N N N 0 -1.455 -4.773 -1.296
38 O47 O O47 N N N 0 -3.488 -1.139 -0.465
39 N49 N N49 N N N 0 -4.575 0.476 0.599
40 C51 C C51 N Y N 0 -0.691 2.482 0.552
41 C53 C C53 N Y N 0 0.475 2.34 -0.177
42 C55 C C55 N Y N 0 -0.683 3.191 1.738
43 C57 C C57 R N N 0 -5.872 -0.14 0.308
44 C59 C C59 N N N 0 -6.192 -1.183 1.381
45 C61 C C61 S N N 0 -7.47 -1.932 0.998
46 C63 C C63 N N N 0 -6.959 0.936 0.303
47 C65 C C65 N N N 0 -7.256 -2.733 -0.268
48 O66 O O66 N N N 0 -7.242 -2.27 -1.388
49 N69 N N69 N N N 0 -7.082 -4.032 0.031
50 C71 C C71 N N N 0 -7.146 -4.259 1.479
51 C73 C C73 N N N 0 -7.815 -2.996 2.066
52 C82 C C82 N N N 0 -6.706 1.91 -0.85
53 C84 C C84 N N N 0 -7.777 2.971 -0.855
54 O86 O O86 N N N 0 -7.758 3.938 -1.785
55 O88 O O88 N N N 0 -8.652 2.95 -0.023
56 H3 H H3 N N N 0 -8.788 5.442 -0.77
57 H3A H H3A N N N 0 -9.785 4.43 -1.843
58 H4 H H4 N N N 0 7.36 -0.765 1.376
59 H5A H H5A N N N 0 -7.67 6.437 -2.747
60 H5 H H5 N N N 0 -9.431 6.682 -2.818
61 H5B H H5B N N N 0 -8.666 5.425 -3.82
62 H7 H H7 N N N 0 2.559 2.801 -0.29
63 H9 H H9 N N N 0 2.575 4.06 1.826
64 H10 H H10 N N N 0 10.95 1.581 -1.509
65 H11 H H11 N N N 0 0.498 4.312 3.124
66 H12 H H12 N N N 0 0.047 -5.544 0.866
67 H12A H H12A N N N 0 0.631 -6.357 -0.606
68 H12B H H12B N N N 0 1.637 -5.12 0.186
69 H13 H H13 N N N 0 6.016 -0.098 -1.286
70 H13A H H13A N N N 0 6.192 -1.749 -0.645
71 H14 H H14 N N N 0 0.375 -2.428 2.31
72 H14A H H14A N N N 0 1.22 -3.969 2.03
73 H14B H H14B N N N 0 2.152 -2.465 2.22
74 H15 H H15 N N N 0 11.887 -0.531 -2.346
75 H16 H H16 N N N 0 10.722 -2.656 -1.925
76 H18 H H18 N N N 0 8.611 -2.677 -0.657
77 H19 H H19 N N N 0 9.57 3.541 -0.433
78 H20 H H20 N N N 0 7.977 5.027 0.703
79 H21 H H21 N N N 0 5.968 4.097 1.778
80 HN21 H HN21 N N N 0 2.608 -0.275 1.456
81 H22 H H22 N N N 0 5.545 1.672 1.719
82 H23 H H23 N N N 0 1.312 -1.008 -1.052
83 H25 H H25 N N N 0 1.959 -3.217 -0.175
84 HN33 H HN33 N N N 0 -1.189 -0.934 -0.728
85 H37 H H37 N N N 0 -2.026 0.468 1.692
86 H41 H H41 N N N 0 -1.958 1.83 -1.037
87 H41A H H41A N N N 0 -2.819 2.463 0.386
88 H43 H H43 N N N 0 0.729 -5.006 -2.81
89 H43A H H43A N N N 0 0.396 -3.26 -2.73
90 H43B H H43B N N N 0 1.827 -3.932 -1.911
91 H45 H H45 N N N 0 -2.045 -4.927 -0.393
92 H45A H H45A N N N 0 -1.922 -4.001 -1.908
93 H45B H H45B N N N 0 -1.406 -5.704 -1.861
94 HN49 H HN49 N N N 0 -4.535 1.322 1.073
95 H53 H H53 N N N 0 0.469 1.786 -1.104
96 H55 H H55 N N N 0 -1.594 3.302 2.308
97 H57 H H57 N N N 0 -5.833 -0.623 -0.668
98 H59 H H59 N N N 0 -5.366 -1.89 1.458
99 H59A H H59A N N N 0 -6.336 -0.686 2.34
100 H61 H H61 N N N 0 -8.297 -1.234 0.872
101 H63 H H63 N N N 0 -7.934 0.467 0.175
102 H63A H H63A N N N 0 -6.938 1.479 1.248
103 HN69 H HN69 N N N 0 -6.934 -4.729 -0.627
104 H71 H H71 N N N 0 -7.748 -5.141 1.697
105 H71A H H71A N N N 0 -6.142 -4.378 1.887
106 H73 H H73 N N N 0 -7.378 -2.736 3.03
107 H73A H H73A N N N 0 -8.893 -3.129 2.15
108 H82 H H82 N N N 0 -5.731 2.379 -0.722
109 H82A H H82A N N N 0 -6.727 1.368 -1.795