Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : G9D

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 37


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N11 N N11 N N N 0 2.812 0.468 0.28
2 N12 N N12 N N N 0 0.587 -0.855 0.237
3 N13 N N13 N N N 0 -0.277 -1.945 0.256
4 N14 N N14 N Y N 0 -2.506 2.654 -0.165
5 OAA O OAA N N N 0 -2.105 -3.149 0.227
6 CAB C CAB N Y N 0 -4.867 -0.266 -0.118
7 CAC C CAC N Y N 0 -4.529 1.071 -0.184
8 CAD C CAD N Y N 0 -3.906 -1.263 0.001
9 CAE C CAE N Y N 0 -1.153 2.434 -0.072
10 CAF C CAF N N N 0 5.219 0.377 0.715
11 CAG C CAG N N N 0 4.225 -1.26 -0.724
12 CAH C CAH N N N 0 4.003 1.291 0.535
13 CAI C CAI N N N 0 3.0 -0.363 -0.918
14 CAJ C CAJ N N N 0 1.611 1.304 0.158
15 OAN O OAN N N N 0 5.367 -0.444 -0.446
16 CAO C CAO N N N 0 0.386 0.426 0.144
17 CAP C CAP N N N 0 -1.624 -2.034 0.183
18 CAQ C CAQ N Y N 0 -3.192 1.459 -0.13
19 CAR C CAR N Y N 0 -0.915 1.109 0.025
20 CAS C CAS N Y N 0 -2.569 -0.903 0.057
21 CAT C CAT N Y N 0 -2.231 0.456 -0.01
22 HN13 H HN13 N N N 0 0.17 -2.802 0.337
23 HAB H HAB N N N 0 -5.909 -0.546 -0.161
24 HAC H HAC N N N 0 -5.303 1.818 -0.276
25 HAD H HAD N N N 0 -4.196 -2.302 0.05
26 HAE H HAE N N N 0 -0.396 3.204 -0.078
27 HAF H HAF N N N 0 6.114 0.985 0.847
28 HAFA H HAFA N N N 0 5.074 -0.253 1.592
29 HAG H HAG N N N 0 4.051 -1.939 0.111
30 HAGA H HAGA N N N 0 4.402 -1.837 -1.632
31 HAH H HAH N N N 0 4.172 1.959 -0.309
32 HAHA H HAHA N N N 0 3.853 1.878 1.441
33 HAI H HAI N N N 0 2.116 -0.983 -1.073
34 HAIA H HAIA N N N 0 3.152 0.279 -1.786
35 HAJ H HAJ N N N 0 1.557 1.989 1.004
36 HN14 H HN14 N N N 0 -2.921 3.527 -0.244
37 HAJA H HAJA N N N 0 1.659 1.876 -0.769