Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : G9N

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 53


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N Y N 0 -5.907 0.639 -0.223
2 C5 C C2 N Y N 0 -7.053 1.15 0.356
3 C6 C C3 N Y N 0 -7.724 0.421 1.321
4 C7 C C4 N N N 0 -4.186 -1.16 -0.476
5 C8 C C5 N N N 0 -2.961 -0.725 0.331
6 C10 C C6 N N N 0 -0.543 -1.014 0.255
7 C17 C C7 N Y N 0 0.467 -1.301 -4.098
8 C20 C C8 N N N 0 2.549 -3.399 0.763
9 C24 C C9 N Y N 0 3.236 0.817 1.016
10 C26 C C10 N Y N 0 2.417 3.055 0.752
11 C28 C C11 N Y N 0 1.061 1.199 0.065
12 C31 C C12 N N N 0 3.827 4.833 1.465
13 O30 O O1 N N N 0 2.593 4.396 0.892
14 C27 C C13 N Y N 0 1.241 2.562 0.203
15 CL CL CL1 N N N 0 -0.005 3.659 -0.306
16 C25 C C14 N Y N 0 3.413 2.18 1.158
17 C23 C C15 N Y N 0 2.06 0.323 0.467
18 N13 N N1 N N N 0 1.882 -1.058 0.318
19 C19 C C16 N N N 0 2.797 -1.913 0.818
20 O22 O O2 N N N 0 3.819 -1.487 1.313
21 C11 C C17 S N N 0 0.703 -1.574 -0.381
22 C14 C C18 N Y N 0 0.757 -1.16 -1.829
23 C18 C C19 N Y N 0 0.312 -1.889 -2.854
24 C16 C C20 N Y N 0 1.042 -0.098 -4.083
25 S15 S S1 N Y N 0 1.424 0.353 -2.427
26 O12 O O3 N N N 0 -0.46 -0.335 1.256
27 N9 N N2 N N N 0 -1.75 -1.269 -0.287
28 C3 C C21 N Y N 0 -5.432 -0.601 0.161
29 C2 C C22 N Y N 0 -6.1 -1.327 1.129
30 C1 C C23 N Y N 0 -7.249 -0.819 1.705
31 H1 H H1 N N N 0 -5.385 1.207 -0.979
32 H2 H H2 N N N 0 -7.425 2.119 0.057
33 H3 H H3 N N N 0 -8.619 0.821 1.774
34 H4 H H4 N N N 0 -4.1 -0.787 -1.496
35 H5 H H5 N N N 0 -4.243 -2.249 -0.491
36 H6 H H6 N N N 0 -2.904 0.363 0.347
37 H7 H H7 N N N 0 -3.047 -1.099 1.352
38 H8 H H8 N N N 0 0.15 -1.783 -5.011
39 H9 H H9 N N N 0 1.593 -3.626 1.235
40 H10 H H10 N N N 0 2.526 -3.725 -0.277
41 H12 H H12 N N N 0 4.014 0.136 1.328
42 H13 H H13 N N N 0 0.146 0.816 -0.362
43 H14 H H14 N N N 0 3.929 4.418 2.467
44 H15 H H15 N N N 0 4.656 4.492 0.845
45 H16 H H16 N N N 0 3.837 5.921 1.519
46 H17 H H17 N N N 0 4.328 2.563 1.584
47 H18 H H18 N N N 0 0.688 -2.662 -0.315
48 H19 H H19 N N N 0 -0.136 -2.863 -2.724
49 H20 H H20 N N N 0 1.243 0.507 -4.956
50 H21 H H21 N N N 0 -1.817 -1.813 -1.088
51 H22 H H22 N N N 0 -5.728 -2.296 1.429
52 H23 H H23 N N N 0 -7.773 -1.388 2.458
53 CL1 CL CL2 N N Y 0 3.871 -4.261 1.634