Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : GCT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 21


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 1.559 -0.304 0.921
2 C2 C C2 S N N 0 0.482 0.248 1.856
3 O2 O O2 N N N 0 0.709 -0.231 3.183
4 C3 C C3 S N N 0 -0.893 -0.222 1.37
5 O3 O O3 N N N 0 -1.921 0.405 2.139
6 C4 C C4 N N N 0 -1.048 0.161 -0.106
7 C5 C C5 S N N 0 0.144 -0.384 -0.893
8 C6 C C6 N N N 0 -0.017 -0.038 -2.35
9 O6A O O6A N N N 0 0.818 0.633 -2.908
10 O6B O O6B N N N 0 -1.089 -0.475 -3.029
11 O5 O O5 N N N 0 1.353 0.191 -0.4
12 H1 H HC11 N N N 0 2.542 0.007 1.275
13 HC12 H HC12 N N N 0 1.507 -1.393 0.912
14 H2 H HC2 N N N 0 0.518 1.337 1.851
15 HO2 H HO2 N N Y 0 1.584 0.084 3.448
16 H3 H HC3 N N N 0 -0.966 -1.304 1.476
17 HO3 H HO3 N N Y 0 -1.785 0.137 3.058
18 H4 H HC41 N N N 0 -1.08 1.247 -0.197
19 HC42 H HC42 N N N 0 -1.971 -0.266 -0.499
20 H5 H HC5 N N N 0 0.187 -1.468 -0.78
21 HO6B H HO6 N N N 0 -1.193 -0.253 -3.964