Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : GI4

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 33


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -0.741 5.365 -0.227
2 C1B C C1B N Y N 0 -0.95 1.788 0.584
3 C2B C C2B R N N 0 -1.004 0.34 0.276
4 C3B C C3B S N N 0 -1.558 -0.432 1.473
5 C4B C C4B R N N 0 -0.955 0.06 2.799
6 C5B C C5B R N N 0 -1.247 1.556 3.062
7 C6B C C6B N N N 0 -0.403 2.055 4.239
8 O2B O O2B N N N 0 -1.85 0.173 -0.849
9 O3B O O3B N N N 0 -1.213 -1.806 1.281
10 O4B O O4B N N N 0 -1.525 -0.69 3.874
11 N1B N N1B N Y N 1 -0.999 2.339 1.861
12 O6B O O6B N N N 0 0.963 1.873 3.918
13 N2B N N2B N Y N 0 -0.816 2.848 -0.291
14 C7B C C7B N Y N 0 -0.829 4.039 0.421
15 C8B C C8B N Y N 0 -0.952 3.726 1.728
16 C2 C C2 N N N 0 0.525 5.576 -1.016
17 O1 O O1 N N N 0 1.431 4.765 -1.133
18 O5 O O5 N N N 0 0.531 6.805 -1.592
19 H1C1 H 1H1C N N N 0 -0.792 6.136 0.552
20 H1C2 H 2H1C N N N 0 -1.594 5.474 -0.91
21 H2B H H2B N N N 0 -0.002 -0.004 -0.002
22 HA H HA N N N 0 -0.749 2.814 -1.299
23 H3B H H3B N N N 0 -2.653 -0.39 1.508
24 HB H HB N N N 0 -2.019 -0.779 -0.934
25 H4B H H4B N N N 0 0.124 -0.137 2.809
26 HC H HC N N N 0 -1.765 -2.319 1.892
27 H5B H H5B N N N 0 -2.301 1.671 3.343
28 HD H HD N N N 0 -1.358 -0.18 4.68
29 H6B1 H 1H6B N N N 0 -0.645 1.483 5.133
30 H6B2 H 2H6B N N N 0 -0.598 3.112 4.41
31 H6B H H6B N N N 0 0.998 1.369 3.087
32 H8B H H8B N N N 0 -1.017 4.368 2.591
33 H5 H H5 N N N 0 1.349 6.962 -2.11