Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : GIX

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 75


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 GA GA GA N N N 3 1.088 -0.132 0.007
2 NA N NA S N N 0 -0.155 -1.366 -0.526
3 NB N NB R N N 1 2.2 -1.211 0.983
4 NC N NC N Y N 0 2.323 0.814 -0.958
5 ND N ND S N N 1 -0.028 1.231 0.508
6 C1A C C1A N N N 0 -1.499 -1.084 -0.644
7 O1A O O1A N N N 0 -6.89 -2.989 -0.815
8 C1B C C1B N N N 0 1.904 -2.485 1.28
9 C1C C C1C N Y N 0 3.668 0.508 -0.965
10 C1D C C1D N N N 0 0.253 2.521 0.277
11 O1D O O1D N N N 0 -6.579 3.541 0.933
12 C2A C C2A N N N 0 -2.023 -2.251 -1.203
13 O2A O O2A N N N 0 -5.851 -2.672 -2.74
14 C2B C C2B N N N 0 2.901 -2.884 2.196
15 C2C C C2C N Y N 0 4.21 1.394 -1.885
16 C2D C C2D N N N 0 -0.777 3.239 1.017
17 O2D O O2D N N N 0 -5.544 3.082 2.83
18 C3A C C3A N N N 0 -1.097 -3.265 -1.011
19 C3B C C3B N N N 0 3.967 -2.007 2.022
20 C3C C C3C N Y N 0 3.244 2.383 -2.16
21 C3D C C3D N N N 0 -1.798 2.335 1.214
22 C4A C C4A N N N 0 -0.004 -2.723 -0.333
23 C4B C C4B N N N 0 3.532 -1.07 0.979
24 C4C C C4C N Y N 0 2.147 2.133 -1.315
25 C4D C C4D N N N 0 -1.358 1.095 0.586
26 CAA C CAA N N N 0 -3.356 -2.384 -1.892
27 CAB C CAB N N N 0 5.257 -2.017 2.733
28 CAC C CAC N N N 0 3.362 3.474 -3.145
29 CAD C CAD N N N 0 -3.102 2.578 1.93
30 CBA C CBA N N N 0 -4.447 -2.632 -0.848
31 CBB C CBB N N N 0 6.179 -1.103 2.449
32 CBC C CBC N N N 0 4.445 4.243 -3.159
33 CBD C CBD N N N 0 -4.181 2.954 0.913
34 CGA C CGA N N N 0 -5.781 -2.766 -1.537
35 CGD C CGD N N N 0 -5.484 3.197 1.629
36 CHA C CHA N N N 0 -2.065 0.059 -0.066
37 CHB C CHB N N N 0 0.94 -3.236 0.562
38 CHC C CHC N N N 0 4.233 -0.337 0.007
39 CHD C CHD N N N 0 1.197 2.942 -0.688
40 CMA C CMA N N N 0 -1.245 -4.698 -1.454
41 CMB C CMB N N N 0 2.825 -4.031 3.17
42 CMC C CMC N N N 0 5.589 1.312 -2.487
43 CMD C CMD N N N 0 -0.734 4.674 1.473
44 HO1A H HO1A N N N 0 -7.722 -3.068 -1.301
45 HO1D H HO1D N N N 0 -7.391 3.687 1.436
46 HAA H HAA N N N 0 -3.577 -1.467 -2.437
47 HAAA H HAAA N N N 0 -3.323 -3.222 -2.589
48 HAB H HAB N N N 0 5.453 -2.767 3.485
49 HAC H HAC N N N 0 2.567 3.648 -3.855
50 HAD H HAD N N N 0 -3.4 1.673 2.459
51 HADA H HADA N N N 0 -2.977 3.392 2.645
52 HBA H HBA N N N 0 -4.226 -3.55 -0.303
53 HBAA H HBAA N N N 0 -4.481 -1.795 -0.151
54 HBB H HBB N N N 0 7.125 -1.111 2.97
55 HBBA H HBBA N N N 0 5.983 -0.354 1.697
56 HBC H HBC N N N 0 4.531 5.042 -3.88
57 HBCA H HBCA N N N 0 5.24 4.069 -2.448
58 HBD H HBD N N N 0 -3.882 3.859 0.384
59 HBDA H HBDA N N N 0 -4.305 2.14 0.198
60 HHA H HHA N N N 0 -3.139 0.158 -0.124
61 HHB H HHB N N N 0 0.935 -4.304 0.721
62 HHC H HHC N N N 0 5.308 -0.431 0.006
63 HHD H HHD N N N 0 1.182 3.985 -0.967
64 HMA H HMA N N N 0 -2.203 -4.825 -1.959
65 HMAA H HMAA N N N 0 -0.436 -4.95 -2.141
66 HMAB H HMAB N N N 0 -1.202 -5.354 -0.585
67 HMB H HMB N N N 0 3.207 -4.936 2.696
68 HMBA H HMBA N N N 0 3.426 -3.801 4.05
69 HMBB H HMBB N N N 0 1.788 -4.187 3.468
70 HMC H HMC N N N 0 5.553 0.72 -3.401
71 HMCA H HMCA N N N 0 5.945 2.316 -2.719
72 HMCB H HMCB N N N 0 6.269 0.842 -1.776
73 HMD H HMD N N N 0 -1.154 5.315 0.698
74 HMDA H HMDA N N N 0 -1.315 4.782 2.389
75 HMDB H HMDB N N N 0 0.3 4.964 1.663