Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : GOB

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 60


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 1.599 4.636 2.016
2 O2 O O2 N N N 0 2.234 3.43 1.587
3 C3 C C3 N Y N 0 1.462 2.529 0.924
4 C4 C C4 N Y N 0 0.124 2.799 0.691
5 C5 C C5 N Y N 0 -0.661 1.878 0.013
6 C6 C C6 N Y N 0 -0.108 0.687 -0.431
7 C7 C C7 N Y N 0 1.227 0.414 -0.2
8 C8 C C8 N Y N 0 2.018 1.334 0.472
9 N9 N N9 N N N 0 3.374 1.059 0.701
10 C10 C C10 N N N 0 4.071 0.319 -0.185
11 O11 O O11 N N N 0 3.549 -0.039 -1.219
12 C12 C C12 N N N 0 5.498 -0.063 0.111
13 C13 C C13 N N N 0 6.054 -0.896 -1.046
14 C14 C C14 N N N 0 7.481 -1.278 -0.751
15 O15 O O15 N N N 0 8.001 -0.921 0.28
16 O16 O O16 N N N 0 8.175 -2.015 -1.632
17 S17 S S17 N N N 0 -1.108 -0.481 -1.292
18 O18 O O18 N N N 0 -1.794 0.246 -2.302
19 O19 O O19 N N N 0 -0.274 -1.597 -1.568
20 N20 N N20 N N N 0 -2.264 -1.011 -0.231
21 C21 C C21 N Y N 0 -1.897 -1.781 0.875
22 C22 C C22 N Y N 0 -0.751 -2.565 0.828
23 C23 C C23 N Y N 0 -0.39 -3.324 1.924
24 C24 C C24 N Y N 0 -1.169 -3.305 3.066
25 C25 C C25 N Y N 0 -2.31 -2.526 3.116
26 C26 C C26 N Y N 0 -2.673 -1.759 2.027
27 C27 C C27 N Y N 0 -3.61 -0.689 -0.444
28 C28 C C28 N Y N 0 -4.609 -1.53 0.03
29 C29 C C29 N Y N 0 -5.936 -1.211 -0.179
30 C30 C C30 N Y N 0 -6.272 -0.05 -0.863
31 C31 C C31 N Y N 0 -5.274 0.79 -1.337
32 C32 C C32 N Y N 0 -3.947 0.475 -1.123
33 N33 N N33 N N N 0 -7.618 0.272 -1.076
34 O34 O O34 N N N 0 -1.975 2.144 -0.215
35 C35 C C35 N N N 0 -2.479 3.389 0.271
36 H1 H H1 N N N 0 1.206 5.168 1.149
37 H7 H H7 N N N 0 1.656 -0.515 -0.547
38 H1A H H1A N N N 0 0.781 4.395 2.695
39 H1B H H1B N N N 0 2.325 5.266 2.531
40 H4 H H4 N N N 0 -0.308 3.727 1.037
41 HN9 H HN9 N N N 0 3.811 1.402 1.496
42 H12 H H12 N N N 0 6.099 0.839 0.231
43 H12A H H12A N N N 0 5.535 -0.649 1.03
44 H13 H H13 N N N 0 5.453 -1.798 -1.166
45 H13A H H13A N N N 0 6.017 -0.311 -1.965
46 HO16 H HO16 N N N 0 9.087 -2.235 -1.399
47 H22 H H22 N N N 0 -0.143 -2.581 -0.064
48 H23 H H23 N N N 0 0.5 -3.934 1.888
49 H24 H H24 N N N 0 -0.885 -3.9 3.922
50 H25 H H25 N N N 0 -2.917 -2.514 4.01
51 H26 H H26 N N N 0 -3.562 -1.147 2.069
52 H28 H H28 N N N 0 -4.347 -2.433 0.562
53 H29 H H29 N N N 0 -6.713 -1.865 0.189
54 H31 H H31 N N N 0 -5.535 1.693 -1.869
55 H32 H H32 N N N 0 -3.17 1.129 -1.492
56 HN33 H HN33 N N N 0 -8.315 -0.315 -0.745
57 HN3A H HN3A N N N 0 -7.852 1.083 -1.553
58 H35 H H35 N N N 0 -3.537 3.475 0.023
59 H35A H H35A N N N 0 -2.355 3.434 1.353
60 H35B H H35B N N N 0 -1.93 4.209 -0.192