Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : H1A

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 32


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 -0.073 -0.626 -0.1
2 C4 C C1 N N N 0 3.295 0.983 0.25
3 C5 C C2 N N N 0 3.014 1.767 1.533
4 C6 C C3 N N N 0 0.935 0.264 -0.005
5 C7 C C4 N Y N 0 -1.399 -0.177 -0.166
6 C8 C C5 N Y N 0 -1.699 1.011 -0.815
7 C10 C C6 N Y N 0 -4.02 0.71 -0.298
8 C1 C C7 N N N 0 4.133 -1.69 -0.784
9 C2 C C8 N N N 0 2.743 -1.096 -1.021
10 C3 C C9 N N N 0 2.352 -0.22 0.17
11 O1 O O1 N N N 0 0.702 1.453 -0.061
12 C9 C C10 N Y N 0 -3.008 1.452 -0.88
13 C11 C C11 N Y N 0 -3.729 -0.478 0.346
14 C12 C C12 N Y N 0 -2.42 -0.926 0.415
15 O2 O O2 N N N 0 -2.132 -2.095 1.048
16 H1 H H1 N N N 0 0.119 -1.576 -0.126
17 H2 H H2 N N N 0 3.133 1.629 -0.613
18 H3 H H3 N N N 0 4.328 0.635 0.255
19 H4 H H4 N N N 0 3.257 1.148 2.397
20 H5 H H5 N N N 0 3.626 2.669 1.549
21 H6 H H6 N N N 0 1.96 2.042 1.568
22 H7 H H7 N N N 0 -0.911 1.593 -1.27
23 H8 H H8 N N N 0 -5.041 1.058 -0.35
24 H9 H H9 N N N 0 4.843 -0.886 -0.589
25 H10 H H10 N N N 0 4.099 -2.361 0.075
26 H11 H H11 N N N 0 4.446 -2.246 -1.667
27 H12 H H12 N N N 0 2.756 -0.491 -1.928
28 H13 H H13 N N N 0 2.017 -1.902 -1.133
29 H14 H H14 N N N 0 2.427 -0.801 1.089
30 H15 H H15 N N N 0 -3.24 2.377 -1.385
31 H16 H H16 N N N 0 -4.522 -1.057 0.796
32 H17 H H17 N N N 0 -1.938 -1.995 1.99