Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : H7Z

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 55


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C8 C C1 N N N 0 3.973 -2.329 -0.136
2 C9 C C2 N N N 0 -0.355 1.26 0.162
3 C11 C C3 N N N 0 -0.978 0.502 1.337
4 C12 C C4 N N N 0 -0.957 0.741 -1.147
5 C13 C C5 N N N 0 -2.497 0.681 1.306
6 C14 C C6 N N N 0 -2.477 0.912 -1.107
7 N7 N N1 N N N 0 -3.025 0.168 0.035
8 C5 C C7 N Y N 0 3.449 1.393 0.209
9 C3 C C8 N Y N 0 3.175 0.033 0.078
10 C4 C C9 R N N 0 2.115 2.094 0.266
11 N2 N N2 N N N 0 1.094 1.046 0.153
12 C1 C C10 N N N 0 1.709 -0.145 0.045
13 N17 N N3 N N N 0 4.998 -3.201 -0.212
14 C18 C C11 N Y N 0 4.752 1.839 0.265
15 C19 C C12 N N N 0 1.988 3.078 -0.9
16 C20 C C13 N Y N 0 5.552 -0.414 0.062
17 C21 C C14 N Y N 0 5.801 0.939 0.192
18 C22 C C15 N N N 0 -5.007 -0.441 -1.268
19 C24 C C16 N N N 0 -6.556 -0.56 1.216
20 C25 C C17 N N N 0 -6.537 -0.413 -1.278
21 C26 C C18 N N N 0 -7.07 -1.197 -0.077
22 C23 C C19 N N N 0 -5.026 -0.589 1.226
23 C16 C C20 N N N 0 -4.494 0.195 0.025
24 O10 O O1 N N N 0 1.141 -1.214 -0.061
25 C6 C C21 N Y N 0 4.242 -0.881 0.003
26 O15 O O2 N N N 0 2.827 -2.733 -0.186
27 H1 H H1 N N N 0 -0.565 2.325 0.263
28 H2 H H2 N N N 0 -0.734 -0.557 1.258
29 H3 H H3 N N N 0 -0.584 0.897 2.274
30 H4 H H4 N N N 0 -0.549 1.306 -1.985
31 H5 H H5 N N N 0 -0.712 -0.315 -1.266
32 H6 H H6 N N N 0 -2.945 0.13 2.133
33 H7 H H7 N N N 0 -2.741 1.739 1.399
34 H8 H H8 N N N 0 -2.721 1.969 -1.001
35 H9 H H9 N N N 0 -2.91 0.53 -2.031
36 H11 H H11 N N N 0 2.009 2.622 1.214
37 H12 H H12 N N N 0 4.822 -4.15 -0.308
38 H13 H H13 N N N 0 5.912 -2.879 -0.172
39 H14 H H14 N N N 0 4.955 2.895 0.366
40 H15 H H15 N N N 0 2.093 2.54 -1.842
41 H16 H H16 N N N 0 1.011 3.559 -0.863
42 H17 H H17 N N N 0 2.769 3.834 -0.823
43 H18 H H18 N N N 0 6.375 -1.111 0.005
44 H19 H H19 N N N 0 6.82 1.296 0.236
45 H20 H H20 N N N 0 -4.663 -1.474 -1.326
46 H21 H H21 N N N 0 -4.628 0.117 -2.124
47 H22 H H22 N N N 0 -6.9 0.473 1.275
48 H25 H H25 N N N 0 -6.903 -0.866 -2.199
49 H23 H H23 N N N 0 -6.936 -1.118 2.072
50 H24 H H24 N N N 0 -6.881 0.62 -1.219
51 H26 H H26 N N N 0 -6.725 -2.229 -0.135
52 H27 H H27 N N N 0 -8.159 -1.176 -0.084
53 H30 H H30 N N N 0 -4.838 1.228 0.083
54 H28 H H28 N N N 0 -4.661 -0.135 2.147
55 H29 H H29 N N N 0 -4.682 -1.621 1.168