Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : H8H

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 70


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 8.804 -0.614 -2.397
2 N2 N N2 N N N 0 8.19 0.221 -1.356
3 C3 C C3 N N N 0 6.974 0.877 -1.856
4 C4 C C4 N N N 0 6.411 1.797 -0.771
5 N5 N N5 N N N 0 6.122 1.008 0.435
6 C6 C C6 N N N 0 5.508 1.843 1.476
7 C7 C C7 N N N 0 4.044 2.108 1.12
8 O8 O O8 N N N 0 3.315 0.879 1.157
9 C9 C C9 N Y N 0 1.991 0.939 0.864
10 C10 C C10 N Y N 0 1.227 -0.229 0.884
11 C11 C C11 N Y N 0 -0.119 -0.194 0.59
12 O12 O O12 N N N 0 -0.854 -1.334 0.612
13 C13 C C13 N N N 0 -0.187 -2.528 1.027
14 C14 C C14 N N N 0 -1.215 -3.529 1.563
15 C15 C C15 N N N 0 -0.502 -4.833 1.931
16 O16 O O16 N N N 0 0.179 -5.343 0.783
17 C17 C C17 N N N 0 1.185 -4.469 0.267
18 C18 C C18 N N N 0 0.54 -3.151 -0.169
19 C19 C C19 N Y N 0 -0.724 1.033 0.267
20 C20 C C20 N Y N 0 -2.099 1.13 -0.043
21 N21 N N21 N N N 0 -2.906 0.011 -0.04
22 C22 C C22 N Y N 0 -4.235 0.106 -0.471
23 C23 C C23 N Y N 0 -5.152 0.86 0.255
24 O24 O O24 N N N 0 -5.016 1.592 1.4
25 C25 C C25 N N N 0 -6.356 1.796 1.886
26 O26 O O26 N N N 0 -7.163 1.738 0.695
27 C27 C C27 N Y N 0 -6.47 0.95 -0.178
28 C28 C C28 N Y N 0 -6.866 0.288 -1.331
29 C29 C C29 N Y N 0 -5.953 -0.46 -2.05
30 C30 C C30 N Y N 0 -4.639 -0.549 -1.628
31 CL3 CL CL3 N N N 0 -3.496 -1.484 -2.54
32 N32 N N32 N Y N 0 -2.593 2.327 -0.338
33 C33 C C33 N Y N 0 -1.831 3.407 -0.344
34 N34 N N34 N Y N 0 -0.549 3.377 -0.065
35 C35 C C35 N Y N 0 0.053 2.218 0.247
36 C36 C C36 N Y N 0 1.416 2.154 0.554
37 C37 C C37 N N N 0 7.338 0.352 0.935
38 C38 C C38 N N N 0 7.902 -0.568 -0.15
39 H11 H H11 N N N 0 9.069 0.008 -3.252
40 H12 H H12 N N N 0 9.702 -1.088 -2.0
41 H13A H H13A N N N 0 8.097 -1.382 -2.711
42 H31 H H31 N N N 0 7.216 1.465 -2.742
43 H32 H H32 N N N 0 6.233 0.121 -2.113
44 H41 H H41 N N N 0 7.142 2.57 -0.533
45 H42 H H42 N N N 0 5.493 2.262 -1.129
46 H61 H H61 N N N 0 5.561 1.327 2.434
47 H62 H H62 N N N 0 6.043 2.791 1.544
48 H71 H H71 N N N 0 3.616 2.806 1.839
49 H72 H H72 N N N 0 3.985 2.535 0.119
50 H10 H H10 N N N 0 1.695 -1.17 1.133
51 H13 H H13 N N N 0 0.533 -2.29 1.81
52 H141 H H141 N N N 0 -1.699 -3.116 2.448
53 H171 H H171 N N N 0 1.928 -4.272 1.04
54 H142 H H142 N N N 0 -1.964 -3.728 0.796
55 H151 H H151 N N N 0 0.218 -4.641 2.726
56 H152 H H152 N N N 0 -1.235 -5.564 2.273
57 H172 H H172 N N N 0 1.668 -4.938 -0.591
58 H181 H H181 N N N 0 -0.173 -3.342 -0.97
59 H182 H H182 N N N 0 1.312 -2.467 -0.522
60 HN21 H HN21 N N N 0 -2.553 -0.84 0.261
61 H251 H H251 N N N 0 -6.637 1.003 2.578
62 H252 H H252 N N N 0 -6.446 2.772 2.363
63 H28 H H28 N N N 0 -7.89 0.358 -1.667
64 H29 H H29 N N N 0 -6.266 -0.974 -2.947
65 H33 H H33 N N N 0 -2.283 4.357 -0.59
66 H36 H H36 N N N 0 2.016 3.052 0.546
67 H371 H H371 N N N 0 8.08 1.108 1.192
68 H372 H H372 N N N 0 7.096 -0.236 1.821
69 H381 H H381 N N N 0 7.17 -1.341 -0.388
70 H382 H H382 N N N 0 8.82 -1.034 0.208