Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : HJH

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 23


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 2.731 -0.793 -0.295
2 N3 N N2 N Y N 0 1.592 0.909 0.466
3 C4 C C1 N Y N 0 1.504 -1.217 -0.071
4 C5 C C2 N N N 0 3.93 1.444 -0.033
5 C6 C C3 N N N 0 -2.987 0.106 -0.037
6 C1 C C4 S N N 0 -1.53 0.229 -0.402
7 C2 C C5 N N N 0 -0.669 -0.125 0.812
8 C3 C C6 N Y N 0 0.785 -0.121 0.415
9 N2 N N3 N Y N 0 2.762 0.565 0.055
10 N4 N N4 N N N 0 -1.245 1.609 -0.819
11 O1 O O1 N N N 0 -3.573 -1.101 -0.015
12 O2 O O2 N N N 0 -3.627 1.094 0.236
13 O3 O O3 N N N 0 1.03 -2.475 -0.273
14 H4 H H1 N N N 0 4.483 1.409 0.906
15 H6 H H2 N N N 0 4.575 1.112 -0.846
16 H5 H H3 N N N 0 3.602 2.466 -0.223
17 H1 H H4 N N N 0 -1.301 -0.453 -1.221
18 H3 H H5 N N N 0 -0.832 0.61 1.6
19 H2 H H6 N N N 0 -0.943 -1.115 1.176
20 H7 H H7 N N N 0 -1.449 2.26 -0.076
21 H8 H H8 N N N 0 -0.289 1.702 -1.13
22 H11 H H10 N N N 0 -4.51 -1.13 0.225
23 H10 H H11 N N N 0 1.118 -3.057 0.494