Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : HKG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 61


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C18 C C1 N Y N 0 3.286 -0.343 0.013
2 N5 N N1 N Y N 0 -1.329 -0.815 -0.816
3 C13 C C2 N Y N 0 -1.72 5.67 -0.819
4 C12 C C3 N Y N 0 -1.643 4.522 -1.585
5 C16 C C4 N Y N 0 1.094 0.112 0.072
6 C15 C C5 N Y N 0 -2.261 4.464 1.067
7 C11 C C6 N Y N 0 -1.887 3.294 -0.989
8 C10 C C7 N Y N 0 -2.202 3.268 0.366
9 C22 C C8 N N N 0 5.301 -1.234 1.151
10 C6 C C9 N Y N 0 -2.461 -1.316 -1.275
11 C1 C C10 N Y N 0 -3.674 -0.702 -1.001
12 C4 C C11 N Y N 0 -1.302 0.284 -0.081
13 C21 C C12 N N N 0 4.723 -0.056 0.363
14 C2 C C13 N Y N 0 -3.69 0.46 -0.229
15 C3 C C14 N Y N 0 -2.483 0.958 0.237
16 N7 N N2 N N N 0 -0.08 0.775 0.382
17 S8 S S1 N N N 0 -5.177 -1.381 -1.62
18 O9 O O1 N N N 0 -2.449 2.088 0.993
19 N14 N N3 N Y N 0 -2.016 5.61 0.464
20 N17 N N4 N Y N 0 2.318 0.442 0.427
21 N19 N N5 N Y N 0 2.965 -1.372 -0.715
22 S20 S S2 N Y N 0 1.274 -1.317 -0.873
23 C23 C C15 N N N 0 6.751 -0.924 1.535
24 N24 N N6 N N N 0 7.501 -0.586 0.318
25 C25 C C16 N N N 0 6.984 0.472 -0.56
26 C26 C C17 N N N 0 5.531 0.147 -0.921
27 C27 C C18 N Y N 0 -5.749 -2.369 -0.278
28 N28 N N7 N Y N 0 -4.995 -2.508 0.802
29 C29 C C19 N Y N 0 -5.386 -3.239 1.829
30 C30 C C20 N Y N 0 -6.603 -3.89 1.812
31 C31 C C21 N Y N 0 -7.424 -3.77 0.698
32 C32 C C22 N Y N 0 -6.99 -2.992 -0.361
33 C33 C C23 N N N 0 8.643 -1.234 0.013
34 C34 C C24 N N N 0 9.1 -2.394 0.859
35 O35 O O2 N N N 0 9.302 -0.884 -0.943
36 C36 C C25 N N N 0 -2.595 4.45 2.537
37 H1 H H1 N N N 0 -1.531 6.629 -1.278
38 H2 H H2 N N N 0 -1.395 4.58 -2.634
39 H3 H H3 N N N 0 -1.834 2.381 -1.563
40 H4 H H4 N N N 0 4.711 -1.392 2.054
41 H5 H H5 N N N 0 5.272 -2.132 0.535
42 H6 H H6 N N N 0 -2.442 -2.215 -1.873
43 H7 H H7 N N N 0 4.775 0.848 0.971
44 H8 H H8 N N N 0 -4.62 0.959 0.0
45 H9 H H9 N N N 0 -0.055 1.581 0.922
46 H10 H H10 N N N 0 6.774 -0.08 2.225
47 H11 H H11 N N N 0 7.198 -1.798 2.009
48 H12 H H12 N N N 0 7.025 1.43 -0.041
49 H13 H H13 N N N 0 7.584 0.52 -1.468
50 H14 H H14 N N N 0 5.5 -0.765 -1.518
51 H15 H H15 N N N 0 5.104 0.971 -1.492
52 H16 H H16 N N N 0 -4.745 -3.33 2.693
53 H17 H H17 N N N 0 -6.914 -4.487 2.657
54 H18 H H18 N N N 0 -8.381 -4.269 0.66
55 H19 H H19 N N N 0 -7.605 -2.874 -1.241
56 H20 H H20 N N N 0 8.688 -3.321 0.459
57 H21 H H21 N N N 0 10.189 -2.446 0.847
58 H22 H H22 N N N 0 8.755 -2.255 1.883
59 H23 H H23 N N N 0 -3.673 4.541 2.665
60 H24 H H24 N N N 0 -2.254 3.514 2.978
61 H25 H H25 N N N 0 -2.098 5.286 3.03