Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : HKM

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 34


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C18 C C1 N Y N 0 -4.901 0.434 -1.725
2 C13 C C2 N Y N 0 -0.844 -0.588 -0.254
3 C12 C C3 N Y N 0 -1.583 -1.748 -0.073
4 C17 C C4 N Y N 0 -3.52 0.412 -1.727
5 C16 C C5 N Y N 0 -2.82 0.608 -0.546
6 C15 C C6 N N N 0 -2.809 1.033 1.874
7 C11 C C7 N Y N 0 -0.907 -2.925 0.218
8 C10 C C8 N Y N 0 0.47 -2.908 0.318
9 C8 C C9 N Y N 0 0.546 -0.646 -0.137
10 N2 N N1 N Y N 0 3.48 1.472 -0.347
11 C6 C C10 N N N 0 5.813 2.323 -0.343
12 C1 C C11 N Y N 0 2.684 0.458 -0.2
13 C4 C C12 N Y N 0 5.083 -0.024 0.079
14 C19 C C13 N Y N 0 -5.597 0.657 -0.548
15 C20 C C14 N Y N 0 -4.917 0.854 0.635
16 C21 C C15 N Y N 0 -3.521 0.828 0.649
17 C3 C C16 N Y N 0 4.773 1.242 -0.202
18 S5 S S1 N Y N 0 3.586 -0.95 0.155
19 N7 N N2 N N N 0 1.303 0.51 -0.315
20 N9 N N3 N Y N 0 1.15 -1.79 0.142
21 O14 O O1 N N N 0 -1.463 0.586 -0.546
22 N22 N N4 N N N 0 -2.244 1.195 2.846
23 H1 H H1 N N N 0 -5.442 0.281 -2.647
24 H2 H H2 N N N 0 -2.66 -1.736 -0.157
25 H3 H H3 N N N 0 -2.984 0.243 -2.649
26 H4 H H4 N N N 0 -1.452 -3.846 0.365
27 H5 H H5 N N N 0 0.999 -3.822 0.545
28 H6 H H6 N N N 0 5.988 2.789 0.627
29 H7 H H7 N N N 0 6.742 1.887 -0.71
30 H8 H H8 N N N 0 5.461 3.076 -1.049
31 H9 H H9 N N N 0 6.078 -0.414 0.233
32 H10 H H10 N N N 0 -6.676 0.677 -0.558
33 H11 H H11 N N N 0 -5.464 1.028 1.55
34 H12 H H12 N N N 0 0.864 1.35 -0.52