Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : HN7

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 54


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O10 O O10 N N N 0 0.482 -1.95 1.074
2 C10 C C10 N N N 0 0.762 -0.889 0.559
3 C11 C C11 N Y N 0 2.172 -0.528 0.336
4 C12 C C12 N Y N 0 3.191 -1.407 0.716
5 C13 C C13 N Y N 0 4.509 -1.062 0.504
6 C14 C C14 N Y N 0 4.824 0.151 -0.083
7 C17 C C17 N N N 0 6.267 0.52 -0.312
8 C18 C C18 N N N 0 6.921 -0.518 -1.227
9 C19 C C19 N N N 0 6.343 1.899 -0.97
10 C20 C C20 N N N 0 7.004 0.554 1.029
11 C15 C C15 N Y N 0 3.822 1.026 -0.463
12 C16 C C16 N Y N 0 2.499 0.693 -0.263
13 C9 C C9 N N N 0 -0.333 0.058 0.141
14 C5 C C5 S N N 0 -1.692 -0.613 0.345
15 O8 O O8 N N N 0 -5.601 -1.973 -0.45
16 C6 C C6 N N N 0 -1.835 -1.802 -0.616
17 C7 C C7 N N N 0 -3.219 -2.438 -0.486
18 C8 C C8 R N N 0 -4.319 -1.381 -0.668
19 N4 N N4 N N N 0 -2.758 0.333 0.047
20 C3 C C3 N N N 0 -2.742 1.608 0.765
21 C2 C C2 R N N 0 -4.217 2.069 0.847
22 O2 O O2 N N N 0 -4.403 3.276 0.105
23 C1 C C1 S N N 0 -5.036 0.912 0.211
24 O1 O O1 N N N 0 -5.31 1.179 -1.166
25 C8A C C8A R N N 0 -4.075 -0.282 0.359
26 H12 H H12 N N N 0 2.946 -2.353 1.176
27 H13 H H13 N N N 0 5.297 -1.739 0.798
28 H18 H H18 N N N 0 6.397 -0.542 -2.182
29 H18A H H18A N N N 0 7.965 -0.251 -1.392
30 H18B H H18B N N N 0 6.867 -1.5 -0.758
31 H19 H H19 N N N 0 5.878 2.639 -0.318
32 H19A H H19A N N N 0 7.387 2.166 -1.135
33 H19B H H19B N N N 0 5.819 1.875 -1.925
34 H20 H H20 N N N 0 6.95 -0.429 1.498
35 H20A H H20A N N N 0 8.047 0.821 0.864
36 H20B H H20B N N N 0 6.538 1.293 1.681
37 H15 H H15 N N N 0 4.076 1.971 -0.921
38 H16 H H16 N N N 0 1.717 1.375 -0.564
39 H9 H H9 N N N 0 -0.28 0.964 0.746
40 H9A H H9A N N N 0 -0.209 0.316 -0.91
41 H5 H H5 N N N 0 -1.782 -0.958 1.375
42 H6 H H6 N N N 0 -1.694 -1.455 -1.64
43 H6A H H6A N N N 0 -1.074 -2.547 -0.382
44 H7 H H7 N N N 0 -3.333 -3.21 -1.247
45 H7A H H7A N N N 0 -3.315 -2.89 0.501
46 H3A H H3A N N N 0 -2.15 2.34 0.215
47 H8 H H8 N N N 0 -4.27 -0.965 -1.674
48 HO8 H HO8 N N N 0 -5.806 -2.7 -1.053
49 H3 H H3 N N N 0 -2.335 1.47 1.766
50 H2 H H2 N N N 0 -4.51 2.215 1.887
51 H8A H H8A N N N 0 -4.091 -0.684 1.372
52 HO2 H HO2 N N N 0 -3.88 4.022 0.43
53 H1 H H1 N N N 0 -5.959 0.74 0.763
54 HO1 H HO1 N N N 0 -5.837 1.975 -1.315