Chemical Components in the PDB

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  • NAG (Stereoisomer)
  • LXB (Stereoisomer)
  • NGZ (Stereoisomer)
  • BM7 (Stereoisomer)
  • NAA (Stereoisomer)
  • NDG (Stereoisomer)
  • A2G (Stereoisomer)
  • BM3 (Stereoisomer)
  • NGA (Stereoisomer)
  • LXZ (Stereoisomer)
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PDBeChem : Atoms of Molecule

 Molecule : HSQ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 30


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 0.327 1.008 1.256
2 C2 C C2 R N N 0 -0.852 0.86 0.292
3 C3 C C3 R N N 0 -0.322 0.789 -1.144
4 C4 C C4 S N N 0 0.668 -0.374 -1.254
5 C5 C C5 S N N 0 1.789 -0.178 -0.229
6 C6 C C6 N N N 0 2.751 -1.367 -0.292
7 C7 C C7 N N N 0 -2.893 -0.472 0.282
8 C8 C C8 N N N 0 -3.649 -1.735 0.603
9 N2 N N2 N N N 0 -1.588 -0.368 0.603
10 O3 O O3 N N N 0 0.339 2.013 -1.47
11 O4 O O4 N N N 0 -0.009 -1.605 -0.99
12 O5 O O5 N N N 0 1.225 -0.09 1.081
13 O6 O O6 N N N 0 3.858 -1.13 0.58
14 O7 O O7 N N N 0 -3.458 0.451 -0.265
15 O1 O O61 N N Y 0 1.013 2.233 0.986
16 H1 H H1 N N N 0 -0.041 1.016 2.282
17 H2 H H2 N N N 0 -1.516 1.719 0.393
18 H3 H H3 N N N 0 -1.153 0.627 -1.831
19 H4 H H4 N N N 0 1.092 -0.398 -2.257
20 H5 H H5 N N N 0 2.331 0.74 -0.455
21 H61 H H6 N N N 0 2.23 -2.272 0.021
22 H62 H H6A N N N 0 3.112 -1.489 -1.313
23 H81 H H8 N N N 0 -4.089 -1.653 1.597
24 H82 H H8A N N N 0 -4.441 -1.882 -0.133
25 H83 H H8B N N N 0 -2.967 -2.585 0.576
26 HN2 H HN2 N N N 0 -1.136 -1.107 1.041
27 HO3 H HO3 N N Y 0 0.7 2.037 -2.367
28 HO4 H HO4 N N Y 0 0.559 -2.386 -1.043
29 HO6 H HO6 N N Y 0 4.51 -1.844 0.591
30 HO1 H H15 N N Y 0 1.774 2.392 1.56