Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : I9V

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 41


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C13 C C1 N Y N 0 1.536 -0.016 -0.268
2 C15 C C2 N Y N 0 0.716 -2.309 -0.363
3 C17 C C3 N Y N 0 2.993 -1.825 0.433
4 C20 C C4 N Y N 0 2.586 0.876 0.039
5 C22 C C5 N N N 0 3.481 3.098 0.035
6 C1 C C6 N N N 0 -2.319 -0.896 1.244
7 C2 C C7 N N N 0 -3.497 -0.081 0.706
8 C3 C C8 N N N 0 -4.591 -1.031 0.213
9 C4 C C9 N N N 0 -4.048 0.791 1.805
10 C11 C C10 N Y N 0 -0.673 -0.479 -1.052
11 C12 C C11 N Y N 0 0.304 0.428 -0.768
12 C14 C C12 N Y N 0 1.744 -1.404 -0.065
13 C16 C C13 N Y N 0 -0.471 -1.841 -0.843
14 C18 C C14 N Y N 0 3.944 -0.887 0.698
15 N7 N N1 N N N 0 -3.044 0.76 -0.404
16 N19 N N2 N Y N 0 3.728 0.407 0.502
17 N21 N N3 N N N 0 2.417 2.241 -0.147
18 N23 N N4 N N N 0 3.296 4.387 -0.017
19 N24 N N5 N N N 0 4.737 2.593 0.273
20 O5 O O1 N N N 0 -3.497 1.991 2.049
21 O6 O O2 N N N 0 -4.985 0.411 2.466
22 O9 O O3 N N N 0 -1.933 1.143 -2.575
23 O10 O O4 N N N 0 -2.95 -1.079 -2.047
24 S8 S S1 N N N 0 -2.223 0.083 -1.673
25 CL1 CL CL1 N N N 0 3.314 -3.51 0.704
26 H1 H H1 N N N 0 0.863 -3.368 -0.213
27 H5 H H5 N N N 0 -5.296 -0.481 -0.41
28 H2 H H2 N N N 0 -2.612 -1.391 2.17
29 H3 H H3 N N N 0 -2.029 -1.645 0.508
30 H4 H H4 N N N 0 -1.477 -0.231 1.438
31 H6 H H6 N N N 0 -4.139 -1.834 -0.37
32 H7 H H7 N N N 0 -5.117 -1.455 1.069
33 H8 H H8 N N N 0 0.131 1.482 -0.927
34 H9 H H9 N N N 0 -1.262 -2.538 -1.077
35 H10 H H10 N N N 0 4.903 -1.206 1.08
36 H11 H H11 N N N 0 -3.224 1.713 -0.396
37 H12 H H12 N N N 0 1.551 2.592 -0.406
38 H13 H H13 N N N 0 2.426 4.742 -0.257
39 H14 H H14 N N N 0 4.994 1.735 -0.101
40 H15 H H15 N N N 0 5.367 3.094 0.815
41 H16 H H16 N N N 0 -3.885 2.514 2.763