Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : IMJ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 53


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C20 C C20 N Y N 0 5.067 1.958 -0.532
2 C21 C C21 N Y N 0 5.886 2.759 0.213
3 C22 C C22 N Y N 0 6.465 2.282 1.382
4 C23 C C23 N Y N 0 6.224 0.996 1.811
5 C24 C C24 N Y N 0 5.392 0.163 1.068
6 C25 C C25 N Y N 0 4.809 0.651 -0.116
7 N26 N N26 N Y N 0 4.966 -1.136 1.226
8 C27 C C27 N Y N 0 4.141 -1.484 0.191
9 C28 C C28 N Y N 0 4.004 -0.449 -0.653
10 C29 C C29 N N N 0 5.341 -2.016 2.335
11 C30 C C30 N N N 0 3.482 -2.829 0.025
12 C31 C C31 N N N 0 3.181 -0.424 -1.914
13 N32 N N32 N N N 0 1.86 0.14 -1.624
14 C33 C C33 N N N 0 1.667 1.592 -1.628
15 C34 C C34 N N N 0 0.823 -0.677 -1.354
16 O35 O O35 N N N 0 0.983 -1.883 -1.351
17 C36 C C36 N N N 0 -0.496 -0.114 -1.064
18 C37 C C37 N N N 0 -1.534 -0.932 -0.793
19 C38 C C38 N Y N 0 -2.859 -0.366 -0.502
20 C39 C C39 N Y N 0 -3.949 -1.206 -0.219
21 C40 C C40 N Y N 0 -5.162 -0.632 0.047
22 C41 C C41 N N N 0 -6.357 -1.495 0.356
23 C42 C C42 N N N 0 -7.253 -0.78 1.368
24 C43 C C43 N N N 0 -7.487 0.64 0.927
25 N44 N N44 N N N 0 -6.523 1.336 0.299
26 C45 C C45 N Y N 0 -5.289 0.755 0.03
27 N46 N N46 N Y N 0 -4.243 1.526 -0.241
28 C47 C C47 N Y N 0 -3.056 1.019 -0.496
29 O48 O O48 N N N 0 -8.56 1.163 1.141
30 H20 H H20 N N N 0 4.617 2.337 -1.438
31 H21 H H21 N N N 0 6.086 3.77 -0.11
32 H22 H H22 N N N 0 7.11 2.927 1.959
33 H23 H H23 N N N 0 6.679 0.634 2.721
34 H29 H H29 N N N 0 4.623 -1.904 3.147
35 H29A H H29A N N N 0 5.344 -3.051 1.993
36 H29B H H29B N N N 0 6.337 -1.748 2.691
37 H30 H H30 N N N 0 2.554 -2.852 0.597
38 H30A H H30A N N N 0 3.263 -2.998 -1.029
39 H30B H H30B N N N 0 4.151 -3.609 0.387
40 H31 H H31 N N N 0 3.681 0.19 -2.663
41 H31A H H31A N N N 0 3.066 -1.439 -2.294
42 H33 H H33 N N N 0 1.296 1.907 -2.603
43 H33A H H33A N N N 0 0.945 1.865 -0.858
44 H33B H H33B N N N 0 2.618 2.086 -1.424
45 H36 H H36 N N N 0 -0.638 0.957 -1.066
46 H37 H H37 N N N 0 -1.392 -2.002 -0.791
47 H39 H H39 N N N 0 -3.832 -2.28 -0.211
48 H41 H H41 N N N 0 -6.918 -1.681 -0.56
49 H41A H H41A N N N 0 -6.021 -2.444 0.775
50 H42 H H42 N N N 0 -8.209 -1.3 1.436
51 H42A H H42A N N N 0 -6.77 -0.781 2.345
52 HN44 H HN44 N N N 0 -6.691 2.253 0.032
53 H47 H H47 N N N 0 -2.227 1.678 -0.708