Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : IYG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 36


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAN C CAN N N N 0 4.116 1.312 1.347
2 CN C CN N N N 0 2.95 0.585 1.965
3 ON O ON N N N 0 3.108 -0.518 2.443
4 N N N N N N 0 1.732 1.161 1.986
5 CA C CA S N N 0 0.598 0.454 2.587
6 CB C CB N N N 0 0.37 -0.865 1.847
7 CG C CG N Y N 0 0.074 -0.583 0.397
8 CD1 C CD1 N Y N 0 1.109 -0.516 -0.517
9 CE1 C CE1 N Y N 0 0.841 -0.257 -1.848
10 CD2 C CD2 N Y N 0 -1.23 -0.398 -0.017
11 CE2 C CE2 N Y N 0 -1.504 -0.134 -1.346
12 CZ C CZ N Y N 0 -0.467 -0.065 -2.266
13 OH O OH N N N 0 -0.733 0.188 -3.574
14 I1 I I1 N N N 0 2.41 -0.156 -3.233
15 I2 I I2 N N N 0 -3.482 0.154 -1.973
16 C C C N N N 0 0.893 0.172 4.038
17 O O O N N N 0 2.038 0.004 4.402
18 NT N NT N N N 0 -0.114 0.106 4.93
19 CAT C CAT N N N 0 0.172 -0.167 6.34
20 CT C CT N N N 0 -1.116 -0.187 7.121
21 OT1 O OT1 N N N 0 -2.166 0.006 6.557
22 OT2 O OT2 N N N 0 -1.097 -0.422 8.442
23 HAN1 H 1HAN N N N 0 4.279 2.252 1.874
24 HAN2 H 2HAN N N N 0 5.011 0.694 1.422
25 HAN3 H 3HAN N N N 0 3.903 1.516 0.297
26 H H H N N N 0 1.606 2.043 1.604
27 HA H HA N N N 0 -0.296 1.072 2.512
28 HB1 H HB1 N N N 0 1.264 -1.483 1.923
29 HB2 H HB2 N N N 0 -0.473 -1.391 2.294
30 HD1 H HD1 N N N 0 2.128 -0.666 -0.191
31 HD2 H HD2 N N N 0 -2.037 -0.451 0.698
32 H1O H 1OH N N N 0 -0.87 -0.667 -4.003
33 HT1 H 1HT N N N 0 -1.029 0.24 4.639
34 HAT1 H 1HAT N N N 0 0.666 -1.135 6.429
35 HAT2 H 2HAT N N N 0 0.825 0.611 6.736
36 HXT H HXT N N N 0 -1.924 -0.435 8.943