Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : J0C

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 39


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N N N 0 -0.751 -1.482 -0.755
2 C13 C C2 N N N 0 2.546 -0.138 0.48
3 C17 C C3 N N N 0 5.055 0.501 0.689
4 C8 C C9 N Y N 0 -3.043 -0.307 -0.123
5 C20 C C4 N N N 0 8.299 1.536 1.358
6 C21 C C5 N Y N 0 -2.723 -2.426 0.557
7 C2 C C6 N N N 0 -3.016 1.052 -0.666
8 C4 C C7 N N N 0 -5.136 1.412 0.195
9 C7 C C8 N Y N 0 -4.173 -0.724 0.575
10 C9 C C10 N Y N 0 -2.117 -1.436 -0.121
11 C12 C C11 N N N 0 1.566 -0.84 -0.462
12 C14 C C12 N N N 0 3.948 -0.164 -0.131
13 C18 C C13 N N N 0 6.384 0.386 -0.06
14 C19 C C14 N N N 0 7.45 1.026 0.729
15 N3 N N1 N N N 0 -4.085 1.842 -0.469
16 N5 N N2 N N N 0 -6.198 2.261 0.363
17 N6 N N3 N N N 0 -5.214 0.162 0.72
18 N11 N N4 N N N 0 0.219 -0.814 0.124
19 N15 N N5 N N N 0 4.304 -1.272 -1.021
20 N16 N N6 N N N 0 4.077 -0.192 -1.59
21 N22 N N7 N Y N 0 -3.959 -2.003 0.973
22 O1 O O1 N N N 0 -2.045 1.458 -1.285
23 H1 H H1 N N N 0 -0.453 -2.52 -0.902
24 H2 H H2 N N N 0 -0.779 -0.971 -1.717
25 H6 H H6 N N N 0 5.139 0.005 1.656
26 H3 H H3 N N N 0 2.232 0.896 0.625
27 H4 H H4 N N N 0 2.558 -0.652 1.441
28 H5 H H5 N N N 0 4.813 1.553 0.84
29 H7 H H7 N N N 0 9.059 1.993 1.921
30 H8 H H8 N N N 0 -2.304 -3.404 0.741
31 H9 H H9 N N N 0 1.553 -0.325 -1.423
32 H10 H H10 N N N 0 1.879 -1.874 -0.608
33 H11 H H11 N N N 0 6.626 -0.666 -0.212
34 H12 H H12 N N N 0 6.3 0.882 -1.027
35 H13 H H13 N N N 0 -6.984 1.964 0.848
36 H14 H H14 N N N 0 -6.163 3.158 -0.003
37 H15 H H15 N N N 0 -6.012 -0.109 1.2
38 H16 H H16 N N N 0 0.218 -1.228 1.045
39 H20 H H20 N N N 0 -4.588 -2.539 1.48