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PDBeChem : Atoms of Molecule
Molecule : J3B
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 35
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C10 |
C |
C1 |
N |
Y |
N |
0 |
-1.329 |
-0.586 |
0.405 |
2 |
C12 |
C |
C2 |
N |
Y |
N |
0 |
-0.942 |
0.55 |
-0.298 |
3 |
C15 |
C |
C3 |
N |
N |
N |
0 |
1.293 |
-0.184 |
-0.629 |
4 |
N01 |
N |
N1 |
N |
N |
N |
0 |
-5.455 |
-1.429 |
0.944 |
5 |
C04 |
C |
C4 |
N |
N |
N |
0 |
-5.07 |
-0.298 |
0.256 |
6 |
N05 |
N |
N2 |
N |
N |
N |
0 |
-5.971 |
0.513 |
-0.221 |
7 |
C07 |
C |
C5 |
N |
Y |
N |
0 |
-3.633 |
-0.004 |
0.06 |
8 |
C08 |
C |
C6 |
N |
Y |
N |
0 |
-2.666 |
-0.864 |
0.584 |
9 |
N13 |
N |
N3 |
N |
N |
N |
0 |
0.413 |
0.826 |
-0.484 |
10 |
O16 |
O |
O1 |
N |
N |
N |
0 |
0.897 |
-1.329 |
-0.695 |
11 |
C17 |
C |
C7 |
R |
N |
N |
0 |
2.769 |
0.108 |
-0.709 |
12 |
C19 |
C |
C8 |
N |
N |
N |
0 |
3.539 |
-1.205 |
-0.872 |
13 |
C22 |
C |
C9 |
N |
N |
N |
0 |
5.033 |
-0.918 |
-0.675 |
14 |
C25 |
C |
C10 |
N |
N |
N |
0 |
5.269 |
-0.528 |
0.785 |
15 |
N28 |
N |
N4 |
N |
N |
N |
0 |
4.342 |
0.521 |
1.188 |
16 |
C30 |
C |
C11 |
N |
N |
N |
0 |
3.209 |
0.806 |
0.545 |
17 |
O31 |
O |
O2 |
N |
N |
N |
0 |
2.495 |
1.676 |
0.998 |
18 |
C32 |
C |
C12 |
N |
Y |
N |
0 |
-1.903 |
1.411 |
-0.817 |
19 |
C34 |
C |
C13 |
N |
Y |
N |
0 |
-3.242 |
1.141 |
-0.636 |
20 |
H1 |
H |
H1 |
N |
N |
N |
0 |
-0.581 |
-1.253 |
0.806 |
21 |
H2 |
H |
H2 |
N |
N |
N |
0 |
-4.784 |
-2.032 |
1.299 |
22 |
H3 |
H |
H3 |
N |
N |
N |
0 |
-6.397 |
-1.621 |
1.072 |
23 |
H4 |
H |
H4 |
N |
N |
N |
0 |
-5.701 |
1.309 |
-0.705 |
24 |
H5 |
H |
H5 |
N |
N |
N |
0 |
-2.966 |
-1.747 |
1.13 |
25 |
H6 |
H |
H6 |
N |
N |
N |
0 |
0.722 |
1.746 |
-0.508 |
26 |
H7 |
H |
H7 |
N |
N |
N |
0 |
2.965 |
0.751 |
-1.568 |
27 |
H8 |
H |
H8 |
N |
N |
N |
0 |
3.202 |
-1.923 |
-0.124 |
28 |
H9 |
H |
H9 |
N |
N |
N |
0 |
3.371 |
-1.608 |
-1.87 |
29 |
H10 |
H |
H10 |
N |
N |
N |
0 |
5.611 |
-1.811 |
-0.913 |
30 |
H11 |
H |
H11 |
N |
N |
N |
0 |
5.338 |
-0.101 |
-1.328 |
31 |
H12 |
H |
H12 |
N |
N |
N |
0 |
5.122 |
-1.402 |
1.419 |
32 |
H13 |
H |
H13 |
N |
N |
N |
0 |
6.291 |
-0.167 |
0.9 |
33 |
H14 |
H |
H14 |
N |
N |
N |
0 |
4.563 |
1.046 |
1.974 |
34 |
H15 |
H |
H15 |
N |
N |
N |
0 |
-1.6 |
2.293 |
-1.362 |
35 |
H16 |
H |
H16 |
N |
N |
N |
0 |
-3.988 |
1.807 |
-1.042 |
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