Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : J7B

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 47


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -0.089 0.193 0.031
2 C2 C C2 N Y N 0 -1.346 -0.409 0.014
3 C3 C C3 N Y N 0 -2.489 0.376 0.13
4 C11 C C4 N Y N 0 5.834 -1.107 -0.543
5 C12 C C5 N Y N 0 5.786 -2.397 -0.048
6 C13 C C6 N Y N 0 4.597 -2.91 0.439
7 C14 C C7 N Y N 0 3.455 -2.134 0.435
8 C15 C C8 N N N 0 4.749 1.082 -1.086
9 C16 C C9 N N N 0 4.962 2.049 0.051
10 C19 C C10 N Y N 0 -3.83 -0.258 0.113
11 C21 C C11 N Y N 0 -4.976 0.527 0.229
12 C22 C C12 N Y N 0 -6.221 -0.068 0.213
13 C23 C C13 N Y N 0 -6.333 -1.441 0.083
14 C24 C C14 N Y N 0 -5.199 -2.224 -0.032
15 C25 C C15 N Y N 0 -3.949 -1.64 -0.023
16 C26 C C16 N N N 0 -7.461 0.779 0.339
17 C4 C C17 N Y N 0 -2.372 1.759 0.262
18 C5 C C18 N Y N 0 -1.124 2.352 0.277
19 C6 C C19 N Y N 0 0.015 1.58 0.163
20 C7 C C20 N N N 0 1.131 -0.634 -0.085
21 N8 N N1 N N N 0 2.345 -0.049 -0.069
22 C9 C C21 N Y N 0 3.5 -0.838 -0.062
23 C10 C C22 N Y N 0 4.696 -0.324 -0.546
24 O17 O O1 N N N 0 5.06 1.638 1.183
25 O18 O O2 N N N 0 5.043 3.366 -0.194
26 O20 O O3 N N N 0 1.038 -1.841 -0.195
27 N27 N N2 N N N 0 -7.911 1.189 -0.998
28 H1 H H1 N N N 0 -1.432 -1.481 -0.088
29 H2 H H2 N N N 0 6.763 -0.71 -0.924
30 H3 H H3 N N N 0 6.678 -3.006 -0.043
31 H4 H H4 N N N 0 4.563 -3.918 0.825
32 H5 H H5 N N N 0 2.527 -2.536 0.815
33 H6 H H6 N N N 0 3.811 1.314 -1.589
34 H7 H H7 N N N 0 5.573 1.168 -1.794
35 H8 H H8 N N N 0 -4.889 1.598 0.331
36 H9 H H9 N N N 0 -7.31 -1.902 0.071
37 H10 H H10 N N N 0 -5.293 -3.296 -0.132
38 H11 H H11 N N N 0 -3.065 -2.252 -0.118
39 H12 H H12 N N N 0 -8.248 0.202 0.826
40 H13 H H13 N N N 0 -7.238 1.664 0.935
41 H14 H H14 N N N 0 -3.259 2.368 0.351
42 H15 H H15 N N N 0 -1.039 3.424 0.379
43 H16 H H16 N N N 0 0.988 2.049 0.176
44 H17 H H17 N N N 0 2.418 0.918 -0.062
45 H18 H H18 N N N 0 5.179 3.947 0.567
46 H19 H H19 N N N 0 -8.063 0.387 -1.59
47 H20 H H20 N N N 0 -8.742 1.759 -0.941