Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : J8N

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 42


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C5 C C1 N Y N 0 0.081 -1.92 0.033
2 C6 C C2 N Y N 0 1.398 -1.484 -0.013
3 C7 C C3 N Y N 0 1.685 -0.134 -0.069
4 C8 C C4 N Y N 0 0.653 0.797 -0.08
5 C9 C C5 N Y N 0 -0.68 0.357 -0.034
6 C10 C C6 N Y N 0 -0.954 -1.012 0.023
7 C13 C C7 N Y N 0 2.773 2.56 -0.028
8 C14 C C8 N Y N 0 3.385 2.541 1.219
9 N1 N N1 N N N 0 0.262 -4.307 -1.325
10 C15 C C9 N Y N 0 4.762 2.574 1.312
11 O3 O O1 N N N 0 0.557 -4.184 1.122
12 O20 O O2 N N N 0 -1.541 2.524 -0.093
13 C19 C C10 N N N 0 -1.783 1.334 -0.044
14 N21 N N2 N N N 0 -3.061 0.907 0.001
15 C22 C C11 N N N 0 -4.158 1.878 -0.01
16 C23 C C12 N N N 0 -5.496 1.138 0.047
17 C24 C C13 N N N 0 -6.641 2.152 0.037
18 O25 O O3 N N N 0 -7.89 1.46 0.09
19 S2 S S1 N N N 0 -0.268 -3.646 0.098
20 O4 O O4 N N N 0 -1.684 -3.77 0.095
21 CL1 CL CL1 N N N 0 2.691 -2.641 0.0
22 S12 S S2 N N N 0 1.016 2.52 -0.151
23 C18 C C14 N Y N 0 3.55 2.617 -1.179
24 C17 C C15 N Y N 0 4.927 2.654 -1.079
25 C16 C C16 N Y N 0 5.532 2.625 0.164
26 H1 H H1 N N N 0 2.712 0.198 -0.105
27 H2 H H2 N N N 0 -1.977 -1.358 0.059
28 H3 H H3 N N N 0 2.783 2.501 2.116
29 H4 H H4 N N N 0 0.16 -5.258 -1.486
30 H5 H H5 N N N 0 0.675 -3.743 -1.998
31 H6 H H6 N N N 0 5.238 2.559 2.281
32 H7 H H7 N N N 0 -3.254 -0.042 0.039
33 H8 H H8 N N N 0 -4.069 2.536 0.855
34 H9 H H9 N N N 0 -4.11 2.471 -0.923
35 H10 H H10 N N N 0 -5.584 0.48 -0.817
36 H11 H H11 N N N 0 -5.544 0.545 0.961
37 H12 H H12 N N N 0 -6.552 2.809 0.902
38 H13 H H13 N N N 0 -6.593 2.745 -0.876
39 H14 H H14 N N N 0 -8.663 2.042 0.087
40 H15 H H15 N N N 0 3.078 2.639 -2.149
41 H16 H H16 N N N 0 5.531 2.699 -1.972
42 H17 H H17 N N N 0 6.609 2.655 0.24