Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : J8V

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 43


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C14 C C1 N N N 0 1.675 -0.274 0.656
2 C13 C C2 N N N 0 0.552 0.557 0.526
3 C01 C C3 N Y N 0 -4.173 0.735 -0.267
4 C02 C C4 N Y N 0 -5.451 0.179 -0.194
5 C03 C C5 N Y N 0 -5.698 -0.877 0.686
6 C04 C C6 N Y N 0 -4.681 -1.366 1.48
7 C05 C C7 N Y N 0 -3.416 -0.814 1.408
8 C06 C C8 N Y N 0 -3.159 0.237 0.535
9 C08 C C9 N N N 0 -0.799 0.028 0.748
10 C09 C C10 N N N 0 -6.538 0.705 -1.045
11 C15 C C11 N N N 0 2.95 0.274 0.441
12 C16 C C12 N N N 0 3.078 1.579 0.11
13 C18 C C13 N N N 0 0.747 1.915 0.178
14 C20 C C14 N N N 0 4.453 2.152 -0.118
15 C25 C C15 N Y N 0 2.106 -2.507 0.179
16 C26 C C16 N Y N 0 2.095 -3.846 0.543
17 C27 C C17 N Y N 0 2.674 -4.79 -0.283
18 C28 C C18 N Y N 0 3.263 -4.401 -1.472
19 C29 C C19 N Y N 0 3.276 -3.068 -1.837
20 C30 C C20 N Y N 0 2.698 -2.12 -1.015
21 F21 F F1 N N N 0 4.543 2.644 -1.424
22 F22 F F2 N N N 0 4.681 3.192 0.789
23 F23 F F3 N N N 0 5.412 1.15 0.07
24 N07 N N1 N N N 0 -1.875 0.788 0.462
25 N17 N N2 N N N 0 1.993 2.384 -0.022
26 O10 O O1 N N N 0 -7.771 0.166 -0.973
27 O11 O O2 N N N 0 -6.321 1.623 -1.81
28 O12 O O3 N N N 0 -0.947 -1.095 1.191
29 O19 O O4 N N N 0 -0.212 2.659 0.058
30 O24 O O5 N N N 0 1.533 -1.577 0.987
31 H2 H H2 N N N 0 -3.975 1.549 -0.949
32 H3 H H3 N N N 0 -6.686 -1.31 0.745
33 H4 H H4 N N N 0 -4.874 -2.182 2.16
34 H5 H H5 N N N 0 -2.624 -1.201 2.032
35 H6 H H6 N N N 0 3.828 -0.346 0.54
36 H7 H H7 N N N 0 1.635 -4.149 1.472
37 H8 H H8 N N N 0 2.665 -5.832 0.0
38 H9 H H9 N N N 0 3.716 -5.141 -2.116
39 H10 H H10 N N N 0 3.737 -2.767 -2.766
40 H11 H H11 N N N 0 2.708 -1.078 -1.301
41 H12 H H12 N N N 0 -1.759 1.716 0.205
42 H13 H H13 N N N 0 -8.449 0.543 -1.549
43 H1 H H1 N N N 0 2.118 3.316 -0.261