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PDBeChem : Atoms of Molecule
Molecule : JCT
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 69
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C1 |
C |
C1 |
N |
N |
N |
0 |
15.304 |
29.477 |
-8.483 |
2 |
N1 |
N |
N1 |
N |
N |
N |
0 |
16.355 |
29.631 |
-7.507 |
3 |
O1 |
O |
O1 |
N |
N |
N |
0 |
14.084 |
29.6 |
-8.179 |
4 |
S1 |
S |
S1 |
N |
N |
N |
0 |
18.038 |
26.834 |
-8.703 |
5 |
C2 |
C |
C2 |
R |
N |
N |
0 |
17.636 |
29.352 |
-8.097 |
6 |
N2 |
N |
N2 |
N |
N |
N |
0 |
15.856 |
29.074 |
-9.721 |
7 |
O2 |
O |
O2 |
N |
N |
N |
0 |
19.286 |
26.741 |
-15.242 |
8 |
C3 |
C |
C3 |
N |
N |
N |
0 |
18.345 |
27.902 |
-7.758 |
9 |
N3 |
N |
N3 |
N |
N |
N |
0 |
21.135 |
25.814 |
-14.726 |
10 |
C4 |
C |
C4 |
S |
N |
N |
0 |
17.265 |
29.092 |
-9.673 |
11 |
C5 |
C |
C5 |
S |
N |
N |
0 |
18.096 |
27.868 |
-10.193 |
12 |
C6 |
C |
C6 |
N |
N |
N |
0 |
17.538 |
27.068 |
-11.342 |
13 |
C7 |
C |
C7 |
N |
N |
N |
0 |
18.539 |
26.057 |
-11.959 |
14 |
C8 |
C |
C8 |
N |
N |
N |
0 |
17.927 |
25.321 |
-13.129 |
15 |
C9 |
C |
C9 |
N |
N |
N |
0 |
19.075 |
24.681 |
-13.905 |
16 |
C10 |
C |
C10 |
N |
N |
N |
0 |
19.775 |
25.886 |
-14.654 |
17 |
C11 |
C |
C11 |
N |
N |
N |
0 |
22.932 |
26.434 |
-16.279 |
18 |
C12 |
C |
C12 |
N |
N |
N |
0 |
21.887 |
26.924 |
-15.396 |
19 |
N4 |
N |
N4 |
N |
N |
N |
0 |
23.798 |
25.571 |
-15.413 |
20 |
C13 |
C |
C13 |
N |
N |
N |
0 |
23.111 |
24.378 |
-14.838 |
21 |
N5 |
N |
N5 |
N |
Y |
N |
0 |
27.889 |
25.357 |
-16.462 |
22 |
C14 |
C |
C14 |
N |
N |
N |
0 |
21.898 |
24.854 |
-14.074 |
23 |
O3 |
O |
O3 |
N |
N |
N |
0 |
28.744 |
25.479 |
-19.228 |
24 |
O4 |
O |
O4 |
N |
N |
N |
0 |
26.439 |
25.703 |
-19.904 |
25 |
C17 |
C |
C15 |
N |
Y |
N |
0 |
26.982 |
25.495 |
-17.42 |
26 |
C19 |
C |
C16 |
N |
Y |
N |
0 |
27.59 |
25.275 |
-15.091 |
27 |
C18 |
C |
C17 |
N |
Y |
N |
0 |
26.277 |
25.342 |
-14.631 |
28 |
C20 |
C |
C18 |
N |
Y |
N |
0 |
28.647 |
25.107 |
-14.103 |
29 |
C16 |
C |
C19 |
N |
Y |
N |
0 |
25.624 |
25.606 |
-17.088 |
30 |
C21 |
C |
C20 |
N |
Y |
N |
0 |
28.402 |
25.069 |
-12.679 |
31 |
C15 |
C |
C21 |
N |
Y |
N |
0 |
25.238 |
25.531 |
-15.712 |
32 |
C23 |
C |
C22 |
N |
Y |
N |
0 |
26.043 |
25.2 |
-13.332 |
33 |
C22 |
C |
C23 |
N |
Y |
N |
0 |
27.041 |
25.145 |
-12.275 |
34 |
C24 |
C |
C24 |
N |
N |
N |
0 |
27.402 |
25.58 |
-18.908 |
35 |
C27 |
C |
C27 |
N |
N |
N |
0 |
31.914 |
25.912 |
-17.927 |
36 |
RU1 |
RU |
RU1 |
N |
N |
N |
0 |
29.893 |
25.224 |
-17.373 |
37 |
C25 |
C |
C25 |
N |
N |
N |
0 |
31.07 |
26.967 |
-17.948 |
38 |
C26 |
C |
C26 |
N |
N |
N |
0 |
30.554 |
27.112 |
-16.709 |
39 |
C28 |
C |
C28 |
N |
N |
N |
0 |
31.918 |
25.406 |
-16.675 |
40 |
C29 |
C |
C29 |
N |
N |
N |
0 |
31.078 |
26.149 |
-15.923 |
41 |
O5 |
O |
O5 |
N |
N |
N |
0 |
29.967 |
23.171 |
-17.598 |
42 |
H1 |
H |
H1 |
N |
N |
N |
0 |
16.212 |
29.895 |
-6.553 |
43 |
H2 |
H |
H2 |
N |
N |
N |
0 |
18.362 |
30.173 |
-7.996 |
44 |
H3 |
H |
H3 |
N |
N |
N |
0 |
15.319 |
28.812 |
-10.523 |
45 |
H4 |
H |
H4 |
N |
N |
N |
0 |
18.01 |
27.583 |
-6.76 |
46 |
H5 |
H |
H5 |
N |
N |
N |
0 |
19.435 |
28.048 |
-7.749 |
47 |
H9 |
H |
H9 |
N |
N |
N |
0 |
17.226 |
27.769 |
-12.13 |
48 |
H6 |
H |
H6 |
N |
N |
N |
0 |
17.626 |
29.976 |
-10.22 |
49 |
H7 |
H |
H7 |
N |
N |
N |
0 |
19.144 |
28.152 |
-10.366 |
50 |
H8 |
H |
H8 |
N |
N |
N |
0 |
16.663 |
26.509 |
-10.98 |
51 |
H10 |
H |
H10 |
N |
N |
N |
0 |
19.43 |
26.601 |
-12.305 |
52 |
H11 |
H |
H11 |
N |
N |
N |
0 |
18.831 |
25.327 |
-11.19 |
53 |
H12 |
H |
H12 |
N |
N |
N |
0 |
17.237 |
24.545 |
-12.767 |
54 |
H13 |
H |
H13 |
N |
N |
N |
0 |
17.381 |
26.025 |
-13.774 |
55 |
H14 |
H |
H14 |
N |
N |
N |
0 |
19.78 |
24.189 |
-13.219 |
56 |
H15 |
H |
H15 |
N |
N |
N |
0 |
18.692 |
23.945 |
-14.627 |
57 |
H16 |
H |
H16 |
N |
N |
N |
0 |
22.499 |
25.846 |
-17.101 |
58 |
H17 |
H |
H17 |
N |
N |
N |
0 |
23.512 |
27.272 |
-16.694 |
59 |
H18 |
H |
H18 |
N |
N |
N |
0 |
21.179 |
27.524 |
-15.986 |
60 |
H19 |
H |
H19 |
N |
N |
N |
0 |
22.347 |
27.556 |
-14.622 |
61 |
H20 |
H |
H20 |
N |
N |
N |
0 |
22.799 |
23.702 |
-15.648 |
62 |
H21 |
H |
H21 |
N |
N |
N |
0 |
23.794 |
23.847 |
-14.159 |
63 |
H22 |
H |
H22 |
N |
N |
N |
0 |
22.241 |
25.281 |
-13.12 |
64 |
H23 |
H |
H23 |
N |
N |
N |
0 |
21.255 |
23.983 |
-13.877 |
65 |
H24 |
H |
H24 |
N |
N |
N |
0 |
29.664 |
25.006 |
-14.452 |
66 |
H25 |
H |
H25 |
N |
N |
N |
0 |
24.881 |
25.746 |
-17.859 |
67 |
H26 |
H |
H26 |
N |
N |
N |
0 |
29.206 |
24.988 |
-11.963 |
68 |
H27 |
H |
H27 |
N |
N |
N |
0 |
25.009 |
25.117 |
-13.03 |
69 |
H28 |
H |
H28 |
N |
N |
N |
0 |
26.761 |
25.161 |
-11.232 |
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