Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : JDL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 27


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C9 C C1 N Y N 0 -2.462 0.85 -0.15
2 C12 C C2 N Y N 0 -1.708 -1.422 0.191
3 C6 C C3 N Y N 0 -1.155 1.298 -0.114
4 C13 C C4 N Y N 0 -0.41 -0.983 0.226
5 C5 C C5 N Y N 0 -0.15 0.38 0.067
6 C10 C C6 N Y N 0 -2.733 -0.502 0.003
7 C3 C C7 N N N 0 2.233 0.134 0.193
8 C7 C C8 N N N 0 -0.514 2.661 -0.238
9 C14 C C9 N N N 0 0.788 -1.87 0.45
10 C8 C C10 N N N 0 1.004 2.397 -0.118
11 C1 C C11 N N N 0 2.939 -1.968 -0.902
12 N4 N N1 N N N 0 1.132 0.962 0.054
13 H1 H H1 N N N 0 -3.271 1.552 -0.292
14 N2 N N2 N N N 0 1.992 -1.209 -0.082
15 N15 N N3 N N N 0 3.405 0.579 0.553
16 F11 F F1 N N N 0 -4.013 -0.931 -0.032
17 H2 H H2 N N N 0 -1.933 -2.472 0.308
18 H4 H H4 N N N 0 -0.747 3.103 -1.207
19 H5 H H5 N N N 0 0.913 -2.049 1.518
20 H6 H H6 N N N 0 0.638 -2.82 -0.063
21 H7 H H7 N N N 0 1.515 2.715 -1.026
22 H8 H H8 N N N 0 3.761 -1.319 -1.203
23 H9 H H9 N N N 0 3.331 -2.806 -0.325
24 H10 H H10 N N N 0 2.431 -2.345 -1.79
25 H12 H H12 N N N 0 3.53 1.523 0.735
26 H3 H H3 N N N 0 -0.852 3.314 0.567
27 H15 H H15 N N N 0 1.411 2.92 0.747