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PDBeChem : Atoms of Molecule
Molecule : JGK
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 56
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C2 |
C |
C1 |
N |
Y |
N |
0 |
2.335 |
-0.907 |
-0.07 |
2 |
C3 |
C |
C2 |
N |
Y |
N |
0 |
3.433 |
-0.396 |
-0.748 |
3 |
C4 |
C |
C3 |
N |
Y |
N |
0 |
4.66 |
-1.064 |
-0.686 |
4 |
C5 |
C |
C4 |
N |
Y |
N |
0 |
4.775 |
-2.245 |
0.059 |
5 |
C6 |
C |
C5 |
N |
Y |
N |
0 |
3.683 |
-2.748 |
0.73 |
6 |
C7 |
C |
C6 |
N |
N |
N |
0 |
5.826 |
-0.529 |
-1.402 |
7 |
C10 |
C |
C7 |
N |
N |
N |
0 |
0.279 |
-4.206 |
2.747 |
8 |
C11 |
C |
C8 |
N |
Y |
N |
0 |
1.03 |
-0.204 |
-0.131 |
9 |
C12 |
C |
C9 |
N |
Y |
N |
0 |
0.962 |
1.162 |
0.13 |
10 |
C14 |
C |
C10 |
N |
Y |
N |
0 |
-1.418 |
1.11 |
-0.248 |
11 |
C16 |
C |
C11 |
N |
Y |
N |
0 |
-0.127 |
-0.908 |
-0.455 |
12 |
C18 |
C |
C12 |
N |
Y |
N |
0 |
-0.061 |
3.983 |
1.612 |
13 |
C19 |
C |
C13 |
N |
Y |
N |
0 |
-0.683 |
4.286 |
-0.501 |
14 |
C20 |
C |
C14 |
N |
N |
N |
0 |
-1.074 |
4.15 |
-1.95 |
15 |
C15 |
C |
C18 |
N |
Y |
N |
0 |
-1.347 |
-0.251 |
-0.513 |
16 |
C21 |
C |
C15 |
N |
N |
N |
0 |
-3.682 |
-0.633 |
-0.264 |
17 |
C1 |
C |
C16 |
N |
Y |
N |
0 |
2.46 |
-2.092 |
0.668 |
18 |
C13 |
C |
C17 |
N |
Y |
N |
0 |
-0.263 |
1.819 |
0.072 |
19 |
C22 |
C |
C20 |
N |
Y |
N |
0 |
-4.878 |
-1.439 |
-0.528 |
20 |
C17 |
C |
C19 |
N |
Y |
N |
0 |
-0.339 |
3.275 |
0.35 |
21 |
C23 |
C |
C21 |
N |
Y |
N |
0 |
-6.193 |
-3.001 |
-1.33 |
22 |
C24 |
C |
C22 |
N |
Y |
N |
0 |
-6.956 |
-2.225 |
-0.529 |
23 |
C25 |
C |
C23 |
N |
Y |
N |
0 |
-6.123 |
-1.22 |
-0.013 |
24 |
C8 |
C |
C24 |
N |
N |
N |
0 |
5.674 |
0.674 |
-2.296 |
25 |
C9 |
C |
C25 |
N |
N |
N |
0 |
1.59 |
-3.798 |
2.072 |
26 |
N1 |
N |
N1 |
N |
Y |
N |
0 |
-0.268 |
5.248 |
1.35 |
27 |
N2 |
N |
N2 |
N |
N |
N |
0 |
0.331 |
3.426 |
2.823 |
28 |
N3 |
N |
N3 |
N |
N |
N |
0 |
-2.508 |
-0.96 |
-0.839 |
29 |
O1 |
O |
O1 |
N |
N |
N |
0 |
6.91 |
-1.057 |
-1.274 |
30 |
O2 |
O |
O2 |
N |
N |
N |
0 |
1.389 |
-2.593 |
1.331 |
31 |
H1 |
H |
H1 |
N |
N |
N |
0 |
3.34 |
0.514 |
-1.322 |
32 |
O3 |
O |
O3 |
N |
Y |
N |
0 |
-0.602 |
5.422 |
0.203 |
33 |
O4 |
O |
O4 |
N |
Y |
N |
0 |
-4.942 |
-2.523 |
-1.328 |
34 |
O5 |
O |
O5 |
N |
N |
N |
0 |
-3.749 |
0.331 |
0.476 |
35 |
H2 |
H |
H2 |
N |
N |
N |
0 |
5.722 |
-2.761 |
0.107 |
36 |
H3 |
H |
H3 |
N |
N |
N |
0 |
3.775 |
-3.661 |
1.299 |
37 |
H4 |
H |
H4 |
N |
N |
N |
0 |
0.432 |
-5.125 |
3.312 |
38 |
H5 |
H |
H5 |
N |
N |
N |
0 |
-0.045 |
-3.414 |
3.422 |
39 |
H6 |
H |
H6 |
N |
N |
N |
0 |
-0.485 |
-4.37 |
1.987 |
40 |
H7 |
H |
H7 |
N |
N |
N |
0 |
1.859 |
1.71 |
0.378 |
41 |
H8 |
H |
H8 |
N |
N |
N |
0 |
-2.37 |
1.619 |
-0.293 |
42 |
H9 |
H |
H9 |
N |
N |
N |
0 |
-0.074 |
-1.967 |
-0.662 |
43 |
H10 |
H |
H10 |
N |
N |
N |
0 |
-2.152 |
4.013 |
-2.024 |
44 |
H11 |
H |
H11 |
N |
N |
N |
0 |
-0.783 |
5.051 |
-2.49 |
45 |
H12 |
H |
H12 |
N |
N |
N |
0 |
-0.567 |
3.287 |
-2.383 |
46 |
H13 |
H |
H13 |
N |
N |
N |
0 |
-6.536 |
-3.865 |
-1.88 |
47 |
H14 |
H |
H14 |
N |
N |
N |
0 |
-8.009 |
-2.353 |
-0.326 |
48 |
H15 |
H |
H15 |
N |
N |
N |
0 |
-6.411 |
-0.427 |
0.662 |
49 |
H16 |
H |
H16 |
N |
N |
N |
0 |
4.658 |
1.06 |
-2.216 |
50 |
H17 |
H |
H17 |
N |
N |
N |
0 |
6.38 |
1.446 |
-1.989 |
51 |
H18 |
H |
H18 |
N |
N |
N |
0 |
5.874 |
0.388 |
-3.328 |
52 |
H19 |
H |
H19 |
N |
N |
N |
0 |
2.354 |
-3.634 |
2.832 |
53 |
H20 |
H |
H20 |
N |
N |
N |
0 |
1.913 |
-4.59 |
1.397 |
54 |
H21 |
H |
H21 |
N |
N |
N |
0 |
0.481 |
3.996 |
3.593 |
55 |
H22 |
H |
H22 |
N |
N |
N |
0 |
0.453 |
2.467 |
2.899 |
56 |
H23 |
H |
H23 |
N |
N |
N |
0 |
-2.468 |
-1.687 |
-1.48 |
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