Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : JO2

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 31


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N N N 0 3.564 0.27 1.285
2 C5 C C2 N Y N 0 -2.032 1.414 0.143
3 C6 C C3 N Y N 0 -1.1 0.399 -0.146
4 C11 C C4 N Y N 0 -1.516 -0.928 -0.173
5 C7 C C5 N N N 0 0.313 0.742 -0.418
6 C8 C C6 N Y N 0 -3.358 1.077 0.402
7 C9 C C7 N Y N 0 -3.753 -0.247 0.371
8 C10 C C8 N Y N 0 -2.838 -1.244 0.082
9 C12 C C9 N N N 0 -1.604 2.829 0.176
10 N1 N N1 N N N 0 4.312 -1.105 -0.436
11 N2 N N2 N N N 0 1.297 0.169 0.303
12 C3 C C10 N N N 0 4.555 -0.783 0.84
13 N3 N N3 N N N 1 -3.276 -2.658 0.051
14 C1 C C11 S N N 0 2.696 0.508 0.032
15 C2 C C12 N N N 0 3.285 -0.438 -0.992
16 O1 O O1 N N N 0 5.43 -1.26 1.53
17 O2 O O2 N N N 0 2.895 -0.572 -2.131
18 O3 O O3 N N N 0 0.587 1.541 -1.292
19 O4 O O4 N N N -1 -2.473 -3.539 -0.198
20 O5 O O5 N N N 0 -4.439 -2.94 0.275
21 O6 O O6 N N N 0 -0.428 3.111 0.06
22 O7 O O7 N N N 0 -2.518 3.806 0.334
23 H1 H H1 N N N 0 2.954 -0.101 2.109
24 H2 H H2 N N N 0 4.081 1.186 1.573
25 H3 H H3 N N N 0 -0.807 -1.712 -0.394
26 H4 H H4 N N N 0 -4.077 1.85 0.628
27 H5 H H5 N N N 0 -4.782 -0.505 0.573
28 H6 H H6 N N N 0 4.833 -1.764 -0.921
29 H7 H H7 N N N 0 1.078 -0.469 1.0
30 H8 H H8 N N N 0 2.781 1.541 -0.303
31 H9 H H9 N N N 0 -2.19 4.715 0.35